RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 UIMC1Q96RL1 719 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 UPF3AQ9H1J1 476 aaKnown RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 TFIP11Q9UBB9 837 aaKnown RBP11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 VAV3Q9UKW4 847 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
HLA-DMB-259ENST00000438510 VWA3AA6NCI4 1184 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 SPTLC2O15270 562 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 DYNC1LI2O43237 492 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 CHMP2AO43633 222 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 ZEB2O60315 1214 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 SORBS3O60504 671 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 GJB1P08034 283 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 MMP3P08254 477 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 ACTR2P61160 394 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 NKX3-2P78367 333 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 SP4Q02446 784 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 FSCN1Q16658 493 aaKnown RBP11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 HSDL1Q3SXM5 330 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 NCAPH2Q6IBW4 605 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 MIS18BP1Q6P0N0 1132 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 MIER3Q7Z3K6 550 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 ARRDC4Q8NCT1 418 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 ERMNQ8TAM6 284 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 SEPT1Q8WYJ6 367 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 GJA10Q969M2 543 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 AK8Q96MA6 479 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 DEFB118Q96PH6 123 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 UNC45AQ9H3U1 944 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 KAT6AQ92794 2004 aa11.89□□□□□ -0.51
HLA-DMB-259ENST00000438510 A6NJR5 290 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 KPNA6O60684 536 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 ADAMTS4O75173 837 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 CCNE2O96020 404 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 PSAPP07602 524 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 MARCKSP29966 332 aaPredicted RBP11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 LONP1P36776 959 aaKnown RBP11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 TECP42680 631 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 ME1P48163 572 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 PDIA5Q14554 519 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 DGKDQ16760 1214 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 HAUS3Q68CZ6 603 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 LHX8Q68G74 356 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 B3GNT9Q6UX72 402 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 IGSF22Q8N9C0 903 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 KRI1Q8N9T8 703 aaKnown RBP11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 PCSK9Q8NBP7 692 aaKnown RBP11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 AFG1LQ8WV93 481 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 GPR20Q99678 358 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 DISC1Q9NRI5 854 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 RCOR1Q9UKL0 485 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 SRPRBQ9Y5M8 271 aaKnown RBP11.88□□□□□ -0.51
HLA-DMB-259ENST00000438510 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 SCN10AQ9Y5Y9 1956 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 POTEMA6NI47 508 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 PPFIA4O75335 1185 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 ATG7O95352 703 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 SGPL1O95470 568 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 PGK1P00558 417 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 SUPT20HL2P0C7V6 817 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 TCF7P36402 384 aaPredicted RBP11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 EPHA7Q15375 998 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 GNASQ5JWF2 1037 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 FAM160B1Q5W0V3 765 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 ABHD15Q6UXT9 468 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 KLHDC9Q8NEP7 349 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 GBP4Q96PP9 640 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 AZI2Q9H6S1 392 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 FBXO2Q9UK22 296 aaPredicted RBP11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 OGDHLQ9ULD0 1010 aa11.87□□□□□ -0.51
HLA-DMB-259ENST00000438510 GSTTP1A0A1W2PQM5 241 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 MOXD2PA6NHM9 499 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 DNM1LO00429 736 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 BACH1O14867 736 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 SLC26A4O43511 780 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 CUTAO60888 179 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 MYL3P08590 195 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 PTGS1P23219 599 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 TXLNAP40222 546 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 GJA8P48165 433 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 SLC26A2P50443 739 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 BEX3Q00994 111 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 LRRC41Q15345 812 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 IL17AQ16552 155 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 KRT79Q5XKE5 535 aa11.86□□□□□ -0.51
HLA-DMB-259ENST00000438510 ANKLE1Q8NAG6 615 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms