RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 HOXC8P31273 242 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 ERVFC1P60507 584 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 KCNC3Q14003 757 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 UBE3CQ15386 1083 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 PLPP4Q5VZY2 271 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 CMTR2Q8IYT2 770 aaKnown RBP10.77□□□□□ -0.69
RPE-210ENST00000438204 TMEM57Q8N5G2 664 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 ARHGAP45Q92619 1136 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 STRBPQ96SI9 672 aaKnown RBP10.77□□□□□ -0.69
RPE-210ENST00000438204 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.77□□□□□ -0.69
RPE-210ENST00000438204 COL20A1Q9P218 1284 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 HCSTQ9UBK5 93 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 LIMD1Q9UGP4 676 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 DDX41Q9UJV9 622 aaKnown RBP10.77□□□□□ -0.69
RPE-210ENST00000438204 STX8Q9UNK0 236 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 C2orf16Q68DN1 1984 aa10.77□□□□□ -0.69
RPE-210ENST00000438204 ENPP3O14638 875 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 ABCB7O75027 752 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 IBSPP21815 317 aaPredicted RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 TFAP4Q01664 338 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 APOBRQ0VD83 1088 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 COL9A3Q14050 684 aaPredicted RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 HSDL1Q3SXM5 330 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 SIX5Q8N196 739 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 TDRD5Q8NAT2 981 aaKnown RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 FEZF2Q8TBJ5 459 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 EMID1Q96A84 441 aaPredicted RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 TAAR1Q96RJ0 339 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 RTP3Q9BQQ7 232 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 C16orf70Q9BSU1 422 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 CDV3Q9UKY7 258 aaKnown RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 MRVI1Q9Y6F6 885 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 CNOT1A5YKK6 2376 aaKnown RBP10.76□□□□□ -0.69
RPE-210ENST00000438204 ASPMQ8IZT6 3477 aa10.76□□□□□ -0.69
RPE-210ENST00000438204 CAND2O75155 1236 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 CHRNA1P02708 482 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 TDO2P48775 406 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 LPIN1Q14693 890 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 USH1GQ495M9 461 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 SUMF1Q8NBK3 374 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 CDCA3Q99618 268 aaPredicted RBP10.75□□□□□ -0.69
RPE-210ENST00000438204 RNPEPQ9H4A4 650 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 GPCPD1Q9NPB8 672 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 MIA3Q5JRA6 1907 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 SPEGQ15772 3267 aa10.75□□□□□ -0.69
RPE-210ENST00000438204 PATJQ8NI35 1801 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 FSCN2O14926 492 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 SP9P0CG40 484 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 SRGAP2BP0DMP2 458 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 LAMC2Q13753 1193 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 FAM26DQ5JW98 314 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 ZC3H14Q6PJT7 736 aaKnown RBP10.74□□□□□ -0.69
RPE-210ENST00000438204 TMEM184AQ6ZMB5 413 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 ERC1Q8IUD2 1116 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 RHPN1Q8TCX5 695 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 FRAT1Q92837 279 aaPredicted RBP10.74□□□□□ -0.69
RPE-210ENST00000438204 SPATA33Q96N06 139 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 SETD4Q9NVD3 440 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 NCDNQ9UBB6 729 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 FBXL21Q9UKT6 434 aa10.74□□□□□ -0.69
RPE-210ENST00000438204 HIDE1A8MVS5 230 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 B4DLN1 442 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 NARSO43776 548 aaKnown RBP10.73□□□□□ -0.69
RPE-210ENST00000438204 FGF18O76093 207 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 GGPS1O95749 300 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 LGALS2P05162 132 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
RPE-210ENST00000438204 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
RPE-210ENST00000438204 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
RPE-210ENST00000438204 STXBP2Q15833 593 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 SPECC1Q5M775 1068 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 KANK3Q6NY19 840 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 BTNL9Q6UXG8 535 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 RUFY4Q6ZNE9 571 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 TRIM50Q86XT4 487 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 TRMT2AQ8IZ69 625 aaKnown RBP10.73□□□□□ -0.69
RPE-210ENST00000438204 ZDHHC14Q8IZN3 488 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 SYTL5Q8TDW5 730 aaPredicted RBP10.73□□□□□ -0.69
RPE-210ENST00000438204 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 EHMT1Q9H9B1 1298 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 ZNF287Q9HBT7 754 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 IL17RBQ9NRM6 502 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 COL4A3Q01955 1670 aa10.73□□□□□ -0.69
RPE-210ENST00000438204 FSD2A1L4K1 749 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 POTEMA6NI47 508 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 H3BRB1 525 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 STK25O00506 426 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 DCNP07585 359 aaKnown RBP10.72□□□□□ -0.69
RPE-210ENST00000438204 IFIT2P09913 472 aaKnown RBP10.72□□□□□ -0.69
RPE-210ENST00000438204 UBA1P22314 1058 aaKnown RBP10.72□□□□□ -0.69
RPE-210ENST00000438204 MGAT3Q09327 533 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 PPM1JQ5JR12 505 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 RARS2Q5T160 578 aaKnown RBP10.72□□□□□ -0.69
RPE-210ENST00000438204 SPOUT1Q5T280 376 aaKnown RBP10.72□□□□□ -0.69
RPE-210ENST00000438204 CEP85Q6P2H3 762 aa10.72□□□□□ -0.69
RPE-210ENST00000438204 GIMAP6Q6P9H5 292 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms