RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 MTMR8Q96EF0 704 aa17.16■□□□□ 0.34
HDAC8-213ENST00000436675 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
HDAC8-213ENST00000436675 GPR20Q99678 358 aa17.16■□□□□ 0.34
HDAC8-213ENST00000436675 USP26Q9BXU7 913 aa17.16■□□□□ 0.34
HDAC8-213ENST00000436675 MAP3K20Q9NYL2 800 aaKnown RBP17.16■□□□□ 0.34
HDAC8-213ENST00000436675 KIAA1671Q9BY89 1806 aa17.16■□□□□ 0.34
HDAC8-213ENST00000436675 ADGRA3Q8IWK6 1321 aa17.16■□□□□ 0.34
HDAC8-213ENST00000436675 TTC3P53804 2025 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 C5orf67F2Z3F1 127 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 MRPS9P82933 396 aaKnown RBP17.15■□□□□ 0.34
HDAC8-213ENST00000436675 SEMA3FQ13275 785 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 SMAD4Q13485 552 aaKnown RBP17.15■□□□□ 0.34
HDAC8-213ENST00000436675 BTG3Q14201 252 aaPredicted RBP17.15■□□□□ 0.34
HDAC8-213ENST00000436675 IMMTQ16891 758 aaKnown RBP17.15■□□□□ 0.34
HDAC8-213ENST00000436675 GNPTABQ3T906 1256 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
HDAC8-213ENST00000436675 FAM26DQ5JW98 314 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 RUFY4Q6ZNE9 571 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 KRT23Q9C075 422 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 LMAN2LQ9H0V9 348 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 DIAPH3Q9NSV4 1193 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 CD207Q9UJ71 328 aa17.15■□□□□ 0.34
HDAC8-213ENST00000436675 LOXHD1Q8IVV2 1947 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 ENPP3O14638 875 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 NDUFV1P49821 464 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 NEDD9Q14511 834 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 IER5LQ5T953 404 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 METTL7BQ6UX53 244 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 PRSS33Q8NF86 280 aa17.14■□□□□ 0.33
HDAC8-213ENST00000436675 ZNF215Q9UL58 517 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-213ENST00000436675 ZFHX2Q9C0A1 2572 aaPredicted RBP17.13■□□□□ 0.33
HDAC8-213ENST00000436675 PALM3A6NDB9 673 aaPredicted RBP17.13■□□□□ 0.33
HDAC8-213ENST00000436675 SPATA31C2B4DYI2 1134 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 ADAM17P78536 824 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 ADAM15Q13444 863 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 LPIN1Q14693 890 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 SEC23AQ15436 765 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 SAMD3Q8N6K7 520 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 EDAQ92838 391 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 RWDD3Q9Y3V2 267 aa17.13■□□□□ 0.33
HDAC8-213ENST00000436675 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-213ENST00000436675 DNAJB1P25685 340 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 MARK3P27448 753 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 ICAM3P32942 547 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 NT5C2P49902 561 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 CAMK1Q14012 370 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 CLP1Q92989 425 aaKnown RBP17.12■□□□□ 0.33
HDAC8-213ENST00000436675 PBXIP1Q96AQ6 731 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 INPP4AQ96PE3 977 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-213ENST00000436675 CNNM2Q9H8M5 875 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 EHMT1Q9H9B1 1298 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
HDAC8-213ENST00000436675 PLAGL2Q9UPG8 496 aa17.12■□□□□ 0.33
HDAC8-213ENST00000436675 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 TMEM221A6NGB7 291 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 M0R296 226 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 FIBPO43427 364 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 MMP1P03956 469 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 MGAT3Q09327 533 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 GRM4Q14833 912 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
HDAC8-213ENST00000436675 TRIM67Q6ZTA4 783 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 RBM23Q86U06 439 aaKnown RBP17.11■□□□□ 0.33
HDAC8-213ENST00000436675 DNAJB3Q8WWF6 145 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 ZNF689Q96CS4 500 aaPredicted RBP17.11■□□□□ 0.33
HDAC8-213ENST00000436675 ZBTB10Q96DT7 871 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 DSCC1Q9BVC3 393 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 SENP2Q9HC62 589 aa17.11■□□□□ 0.33
HDAC8-213ENST00000436675 MRPL42Q9Y6G3 142 aaKnown RBP17.11■□□□□ 0.33
HDAC8-213ENST00000436675 PNMA6FA0A0J9YX94 578 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 CYTH3O43739 400 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 RRP1P56182 461 aaKnown RBP17.1■□□□□ 0.33
HDAC8-213ENST00000436675 IGBP1P78318 339 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
HDAC8-213ENST00000436675 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 SNX27Q96L92 541 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 PCDHGC5Q9Y5F6 944 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 CDY2AQ9Y6F7 541 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 NRCAMQ92823 1304 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
HDAC8-213ENST00000436675 CFAP54Q96N23 3096 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 DGKIO75912 1065 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 ITGB1P05556 798 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 CD52P31358 61 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
HDAC8-213ENST00000436675 NRIP1P48552 1158 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 TRAF1Q13077 416 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 FBXO47Q5MNV8 452 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 USP17L6PQ6QN14 398 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 SPPL3Q8TCT6 385 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 PLVAPQ9BX97 442 aa17.09■□□□□ 0.33
HDAC8-213ENST00000436675 FAM49AQ9H0Q0 323 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms