RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MAGEA9P43362 315 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 POLR2FP61218 127 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ARID5AQ03989 594 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 CKAP4Q07065 602 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 PPP2R5AQ15172 486 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 TDRD12Q587J7 1177 aaKnown RBP11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 SLC30A10Q6XR72 485 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 TSG101Q99816 390 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ANO3Q9BYT9 981 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ZHX3Q9H4I2 956 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 ABCB11O95342 1321 aa11.49□□□□□ -0.57
CLSTN1-203ENST00000435891 TACC1O75410 805 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 HSP90B2PQ58FF3 399 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 MS4A14Q96JA4 679 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 TSGA10Q9BZW7 698 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 KCTD10Q9H3F6 313 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 FGFR1OPO95684 399 aaKnown RBP11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 DNA2P51530 1060 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 CDC37Q16543 378 aaPredicted RBP11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 HYIQ5T013 277 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 CCNI2Q6ZMN8 369 aaPredicted RBP11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 DNAAF5Q86Y56 855 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 SPATA4Q8NEY3 305 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 TEKT1Q969V4 418 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 LSM14BQ9BX40 385 aaKnown RBP11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 TLR10Q9BXR5 811 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 AFF2P51816 1311 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 TARSL2A2RTX5 802 aaKnown RBP11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 TUBBP07437 444 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 CRKP46108 304 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 SEPT2Q15019 361 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 SELENOOQ9BVL4 669 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
CLSTN1-203ENST00000435891 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 GREB1LQ9C091 1923 aaPredicted RBP11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 AGPSO00116 658 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 JAG1P78504 1218 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 SPIRE1Q08AE8 756 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 PRR16Q569H4 304 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 KLHDC7AQ5VTJ3 777 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 TRIM59Q8IWR1 403 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 CYP2W1Q8TAV3 490 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 PSD3Q9NYI0 1048 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 SUGT1Q9Y2Z0 365 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 RNF40O75150 1001 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 GDF11O95390 407 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 USH1GQ495M9 461 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 SLFN13Q68D06 897 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 CATSPER3Q86XQ3 398 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM71BQ8TC56 605 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 PACSIN1Q9BY11 444 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM198AQ9UFP1 575 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 ONECUT3O60422 494 aaPredicted RBP11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 PRPF6O94906 941 aaKnown RBP11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 ACTN1P12814 892 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 GCFC2P16383 781 aaKnown RBP11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 GGCXP38435 758 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 SLC12A3P55017 1021 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 PABPC4Q13310 644 aaKnown RBP eCLIP11.47□□□□□ -0.576e-6■■■■■ 28.1
CLSTN1-203ENST00000435891 HHIPL2Q6UWX4 724 aa11.47□□□□□ -0.57
CLSTN1-203ENST00000435891 SIPA1L1O43166 1804 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM86B1E9PN63 330 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 PJA2O43164 708 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM86B2P0C5J1 330 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 POLD1P28340 1107 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 HOXD13P35453 343 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 MEX3CQ5U5Q3 659 aaKnown RBP11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 ETNPPLQ8TBG4 499 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 CRYGNQ8WXF5 182 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 LENG9Q96B70 501 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 IQCDQ96DY2 449 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 NT5C3AQ9H0P0 336 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 IKZF4Q9H2S9 585 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 PACSIN2Q9UNF0 486 aaPredicted RBP11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 A0A087X0T9 212 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM228BP0C875 321 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 ARHGAP4P98171 946 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 ADAM9Q13443 819 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 KCTD19Q17RG1 926 aaPredicted RBP11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 FAM133AQ8N9E0 248 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 TBC1D5Q92609 795 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 CEP72Q9P209 647 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 UTRNP46939 3433 aa11.46□□□□□ -0.57
CLSTN1-203ENST00000435891 RSPH10B2B2RC85 870 aa11.46□□□□□ -0.58
CLSTN1-203ENST00000435891 H0YHG0 523 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms