RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 POTEGQ6S5H5 508 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 POTEEQ6S8J3 1075 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 BTNL9Q6UXG8 535 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 NUCKS1Q9H1E3 243 aaKnown RBP20.54■□□□□ 0.88
CLK1-205ENST00000434813 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 SSU72P8A0A1W2PR75 194 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 SPDYE3A6NKU9 549 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 SRGAP2O75044 1071 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 USP14P54578 494 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 TGFB2P61812 414 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 ASTE1Q2TB18 679 aaPredicted RBP20.54■□□□□ 0.88
CLK1-205ENST00000434813 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 CACNA2D4Q7Z3S7 1137 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 UIMC1Q96RL1 719 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 TBC1D7Q9P0N9 293 aa20.54■□□□□ 0.88
CLK1-205ENST00000434813 YDJCA8MPS7 323 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 AKR1B10O60218 316 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 TACC1O75410 805 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 BMP3P12645 472 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 CIITAP33076 1130 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
CLK1-205ENST00000434813 EDRF1Q3B7T1 1238 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 CATSPER3Q86XQ3 398 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 NELFCDQ8IXH7 590 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 CCDC155Q8N6L0 562 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
CLK1-205ENST00000434813 SYN2Q92777 582 aaPredicted RBP20.53■□□□□ 0.88
CLK1-205ENST00000434813 FAM20AQ96MK3 541 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 EMILIN3Q9NT22 766 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 PIM2Q9P1W9 311 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 JRKLQ9Y4A0 524 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 PJA2O43164 708 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 ERCC3P19447 782 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 RPA1P27694 616 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 USH1GQ495M9 461 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 ZNF277Q9NRM2 450 aaPredicted RBP20.53■□□□□ 0.88
CLK1-205ENST00000434813 FAM184BQ9ULE4 1060 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 CAPN6Q9Y6Q1 641 aa20.53■□□□□ 0.88
CLK1-205ENST00000434813 TARSL2A2RTX5 802 aaKnown RBP20.52■□□□□ 0.88
CLK1-205ENST00000434813 FAM86B1E9PN63 330 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 POLR3GO15318 223 aaPredicted RBP20.52■□□□□ 0.88
CLK1-205ENST00000434813 GH2P01242 217 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 KRT18P05783 430 aaKnown RBP20.52■□□□□ 0.88
CLK1-205ENST00000434813 FAM86B2P0C5J1 330 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 MCM3P25205 808 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 SNAP25P60880 206 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
CLK1-205ENST00000434813 RBM26Q5T8P6 1007 aaKnown RBP20.52■□□□□ 0.88
CLK1-205ENST00000434813 HGSNATQ68CP4 663 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 TXLNBQ8N3L3 684 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 TDRD3Q9H7E2 651 aaKnown RBP20.52■□□□□ 0.88
CLK1-205ENST00000434813 SPON1Q9HCB6 807 aa20.52■□□□□ 0.88
CLK1-205ENST00000434813 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.52■□□□□ 0.88
CLK1-205ENST00000434813 RBAK-RBAKDNI3L0D1 243 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 OPLAHO14841 1288 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 NOL4O94818 638 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 SPATA31C1P0DKV0 1188 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 JAG1P78504 1218 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 SYT2Q8N9I0 419 aaPredicted RBP20.51■□□□□ 0.87
CLK1-205ENST00000434813 CAPZA3Q96KX2 299 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 VPS33BQ9H267 617 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 SNX12Q9UMY4 172 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 EIF3JO75822 258 aaKnown RBP20.51■□□□□ 0.87
CLK1-205ENST00000434813 CYP2C19P33261 490 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 GPS2Q13227 327 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 GIT2Q14161 759 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 IQCEQ6IPM2 695 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 ALS2CR12Q96Q35 445 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 JADE2Q9NQC1 790 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 VAV3Q9UKW4 847 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 DNM3Q9UQ16 869 aa20.51■□□□□ 0.87
CLK1-205ENST00000434813 PSME4Q14997 1843 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 H3BQF6 201 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 CYP3A4P08684 503 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 PRLRP16471 622 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 RAD51AP2Q09MP3 1159 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 FAM83BQ5T0W9 1011 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 CAGE1Q8TC20 777 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 LSM14BQ9BX40 385 aaKnown RBP20.5■□□□□ 0.87
CLK1-205ENST00000434813 MLXIPQ9HAP2 919 aa20.5■□□□□ 0.87
CLK1-205ENST00000434813 PPP1R1BQ9UD71 204 aaPredicted RBP20.5■□□□□ 0.87
CLK1-205ENST00000434813 MAGEA1P43355 309 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 SLC9C1Q4G0N8 1177 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 RSBN1LQ6PCB5 846 aaPredicted RBP20.49■□□□□ 0.87
CLK1-205ENST00000434813 ZNF572Q7Z3I7 529 aaPredicted RBP20.49■□□□□ 0.87
CLK1-205ENST00000434813 CSRNP1Q96S65 589 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 REEP2Q9BRK0 252 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 SUGCTQ9HAC7 445 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 TRAF3IP3Q9Y228 551 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 A0A1W2PRG0 241 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 CETN3O15182 167 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 MSH4O15457 936 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 RAD17O75943 681 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 SERPING1P05155 500 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 PSMC6P62333 389 aa20.49■□□□□ 0.87
CLK1-205ENST00000434813 ADAM9Q13443 819 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms