RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 Q6ZUG5 572 aa6.25□□□□□ -1.41
PTPN4-205ENST00000433888 ANKS3Q6ZW76 656 aa6.25□□□□□ -1.41
PTPN4-205ENST00000433888 KISS1RQ969F8 398 aaPredicted RBP6.25□□□□□ -1.41
PTPN4-205ENST00000433888 AJUBAQ96IF1 538 aa6.25□□□□□ -1.41
PTPN4-205ENST00000433888 KCND1Q9NSA2 647 aa6.25□□□□□ -1.41
PTPN4-205ENST00000433888 PRODHO43272 600 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 IL18BPO95998 194 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 GRK2P25098 689 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 GRK3P35626 688 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 SKIDA1Q1XH10 827 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 SLC43A3Q8NBI5 491 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 Q8TCH9 128 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 SORCS2Q96PQ0 1159 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 CDK5RAP1Q96SZ6 601 aaKnown RBP6.24□□□□□ -1.41
PTPN4-205ENST00000433888 ZFYVE21Q9BQ24 234 aa6.24□□□□□ -1.41
PTPN4-205ENST00000433888 AARSD1Q9BTE6 412 aaKnown RBP6.24□□□□□ -1.41
PTPN4-205ENST00000433888 SCAND2PQ9GZW5 306 aaPredicted RBP6.24□□□□□ -1.41
PTPN4-205ENST00000433888 ACOT7O00154 380 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 ZNF623O75123 536 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 PABPC1P11940 636 aaKnown RBP6.23□□□□□ -1.41
PTPN4-205ENST00000433888 C6P13671 934 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 TACR2P21452 398 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 CSF2RBP32927 897 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 ACVRL1P37023 503 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 GPR85P60893 370 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 KIZQ2M2Z5 673 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 CD276Q5ZPR3 534 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 STYK1Q6J9G0 422 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 ZNF585AQ6P3V2 769 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 SEC61A2Q9H9S3 476 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 ZFP69BQ9UJL9 534 aa6.23□□□□□ -1.41
PTPN4-205ENST00000433888 TCRBV5S4A2TA0A5A2 114 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 ENO2P09104 434 aaPredicted RBP6.22□□□□□ -1.41
PTPN4-205ENST00000433888 PFKPQ01813 784 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 SPIRE1Q08AE8 756 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 NSMFQ6X4W1 530 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.22□□□□□ -1.41
PTPN4-205ENST00000433888 HOMEZQ8IX15 550 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 IFNL3Q8IZI9 196 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 STPG3Q8N7X2 389 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 ST13P5Q8NFI4 369 aaPredicted RBP6.22□□□□□ -1.41
PTPN4-205ENST00000433888 SH3RF2Q8TEC5 729 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 KCNJ15Q99712 375 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 KATNBL1Q9H079 304 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 DEF6Q9H4E7 631 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 JADE2Q9NQC1 790 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 SRRDQ9UH36 339 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 DSEQ9UL01 958 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 TESMINQ9Y4I5 508 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 SLC4A7Q9Y6M7 1214 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 ASXL2Q76L83 1435 aa6.22□□□□□ -1.41
PTPN4-205ENST00000433888 BLACEA4D250 179 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 IQCA1LA6NCM1 817 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 ZNF839A8K0R7 811 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 SOD2P04179 222 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 GNAT1P11488 350 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 DNAJA1P31689 397 aaKnown RBP6.21□□□□□ -1.42
PTPN4-205ENST00000433888 GLRBP48167 497 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 YOD1Q5VVQ6 348 aaPredicted RBP6.21□□□□□ -1.42
PTPN4-205ENST00000433888 KCTD1Q719H9 257 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPN4-205ENST00000433888 ARHGAP20Q9P2F6 1191 aa6.21□□□□□ -1.42
PTPN4-205ENST00000433888 R3HCC1Q9Y3T6 440 aaKnown RBP6.21□□□□□ -1.42
PTPN4-205ENST00000433888 SLPIP03973 132 aa6.2□□□□□ -1.42
PTPN4-205ENST00000433888 SELENOPP49908 381 aa6.2□□□□□ -1.42
PTPN4-205ENST00000433888 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
PTPN4-205ENST00000433888 PALM2Q8IXS6 379 aa6.2□□□□□ -1.42
PTPN4-205ENST00000433888 SEMA4AQ9H3S1 761 aa6.2□□□□□ -1.42
PTPN4-205ENST00000433888 IPPKQ9H8X2 491 aa6.2□□□□□ -1.42
PTPN4-205ENST00000433888 NUB1Q9Y5A7 615 aa6.2□□□□□ -1.42
PTPN4-205ENST00000433888 TRAV20A0A0B4J274 112 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 FOXS1O43638 330 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 FBXO21O94952 628 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 AMHP03971 560 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 RAB33AQ14088 237 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 KRTAP5-3Q6L8H2 238 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 REXO1L1PQ8IX06 675 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 GNRHR2Q96P88 292 aa6.19□□□□□ -1.42
PTPN4-205ENST00000433888 IFRD2Q12894 506 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-205ENST00000433888 SPDYAQ5MJ70 313 aa6.18□□□□□ -1.42
PTPN4-205ENST00000433888 TCTN3Q6NUS6 607 aa6.18□□□□□ -1.42
PTPN4-205ENST00000433888 GPR155Q7Z3F1 870 aa6.18□□□□□ -1.42
PTPN4-205ENST00000433888 ZNF669Q96BR6 464 aaPredicted RBP6.18□□□□□ -1.42
PTPN4-205ENST00000433888 TACO1Q9BSH4 297 aaKnown RBP6.18□□□□□ -1.42
PTPN4-205ENST00000433888 VPS11Q9H270 941 aa6.18□□□□□ -1.42
PTPN4-205ENST00000433888 PTPN22Q9Y2R2 807 aa6.18□□□□□ -1.42
PTPN4-205ENST00000433888 TCAF1Q9Y4C2 921 aa6.18□□□□□ -1.42
PTPN4-205ENST00000433888 H0Y858 1186 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 CYR61O00622 381 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 WNT9AO14904 365 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 MUSKO15146 869 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 ZNF888P0CJ79 500 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-205ENST00000433888 GDF5P43026 501 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 DBPQ10586 325 aaPredicted RBP6.17□□□□□ -1.42
PTPN4-205ENST00000433888 LMF1Q96S06 567 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 CD244Q9BZW8 370 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 TRAF6Q9Y4K3 522 aa6.17□□□□□ -1.42
PTPN4-205ENST00000433888 FAM90A27PA6NNH2 459 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms