RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 TREML1Q86YW5 311 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CACNA2D3Q8IZS8 1091 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 EFHD2Q96C19 240 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 TCP11L1Q9NUJ3 509 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 DDX56Q9NY93 547 aaKnown RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 INTUQ9ULD6 942 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 A0A088AWK7 358 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 GTPBP10A4D1E9 387 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 ANKRD34BA5PLL1 514 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 FOXN3O00409 490 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 ENPP3O14638 875 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 TRPA1O75762 1119 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 ZBED1O96006 694 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 KCNA6P17658 529 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 IL32P24001 234 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 MDH1P40925 334 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 USP14P54578 494 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 PDE4DQ08499 809 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 CYLC2Q14093 348 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 TTC39BQ5VTQ0 682 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 NEK5Q6P3R8 708 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 DBX2Q6ZNG2 339 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 Q6ZNX1 250 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 SEC16BQ96JE7 1060 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 LARSQ9P2J5 1176 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 LEMD3Q9Y2U8 911 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 EFCAB5A4FU69 1503 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 TDRD9Q8NDG6 1382 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 EIF4E1BA6NMX2 242 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 NVLO15381 856 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 HOXA2O43364 376 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 OLFM2O95897 454 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 NQO1P15559 274 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 KPNA1P52294 538 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 CAMK4Q16566 473 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 CDONQ4KMG0 1287 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 GLE1Q53GS7 698 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 DHX32Q7L7V1 743 aaKnown RBP11.84□□□□□ -0.51
CCDC171-202ENST00000432954 OSCP1Q8WVF1 389 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 ATL1Q8WXF7 558 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 MTMR9Q96QG7 549 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 SELENOOQ9BVL4 669 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 PLVAPQ9BX97 442 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 TIMMDC1Q9NPL8 285 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 TNNQ9UQP3 1299 aa11.84□□□□□ -0.51
CCDC171-202ENST00000432954 PTPRKQ15262 1439 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 MAGEA13PA6NCF6 341 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 RASA4BC9J798 803 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 RNF113AO15541 343 aaKnown RBP11.83□□□□□ -0.52
CCDC171-202ENST00000432954 RASA4O43374 803 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 STX6O43752 255 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 LMNAP02545 664 aaKnown RBP11.83□□□□□ -0.52
CCDC171-202ENST00000432954 CDK4P11802 303 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 COL6A2P12110 1019 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 GBP1P32455 592 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 ADCY8P40145 1251 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 HAAOP46952 286 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 HSD17B4P51659 736 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 EMP3P54852 163 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 GNA13Q14344 377 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 HLTFQ14527 1009 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC171-202ENST00000432954 TTMPQ5BVD1 217 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 ZNF600Q6ZNG1 722 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 CACNA2D4Q7Z3S7 1137 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 FAM133AQ8N9E0 248 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 TMEM87BQ96K49 555 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 NAP1L4Q99733 375 aaKnown RBP11.83□□□□□ -0.52
CCDC171-202ENST00000432954 PRR12Q9ULL5 1215 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 TBC1D30Q9Y2I9 924 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 POGZQ7Z3K3 1410 aa11.83□□□□□ -0.52
CCDC171-202ENST00000432954 CCT8L1PA6NM43 557 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 GNAT3A8MTJ3 354 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 TMEM114B3SHH9 223 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 PLSCR1O15162 318 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 PDE5AO76074 875 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 PCNAP12004 261 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 RXRAP19793 462 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 NEK4P51957 841 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 CACNA2D1P54289 1103 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 NLRP6P59044 892 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 APBA1Q02410 837 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 SNRNP48Q6IEG0 339 aaKnown RBP11.82□□□□□ -0.52
CCDC171-202ENST00000432954 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 CYP4X1Q8N118 509 aa11.82□□□□□ -0.52
CCDC171-202ENST00000432954 FBF1Q8TES7 1133 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms