RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 GGT7Q9UJ14 662 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 LZTS1Q9Y250 596 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 RGS12O14924 1447 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 LMNB2Q03252 620 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 TTC30AQ86WT1 665 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 FAF2Q96CS3 445 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 FMO2Q99518 471 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 GOLGA8CPA6NN73 597 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 SLFN14P0C7P3 912 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 RWDD4Q6NW29 188 aaKnown RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 HEXIM2Q96MH2 286 aaKnown RBP12.32□□□□□ -0.44
SEC16A-206ENST00000431893 PCDHA4Q9UN74 947 aa12.32□□□□□ -0.44
SEC16A-206ENST00000431893 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 PSMC1P62191 440 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 AGR3Q8TD06 166 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 PYROXD1Q8WU10 500 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 NR1H4Q96RI1 486 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 NUDCD1Q96RS6 583 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 KIAA0586Q9BVV6 1533 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GTPBP10A4D1E9 387 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 MAPK13O15264 365 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 RINLQ6ZS11 566 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 TDRD7Q8NHU6 1098 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 CCDC124Q96CT7 223 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 DCTN4Q9UJW0 460 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 CSADQ9Y600 493 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 SOS2Q07890 1332 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 E2F6O75461 281 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 PHKA1P46020 1223 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GTSE1Q9NYZ3 720 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 FMNL1O95466 1100 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GGCXP38435 758 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 HSPA2P54652 639 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 CHRNDQ07001 517 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 LRRC14Q15048 493 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 TRIM42Q8IWZ5 723 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 UGGT2Q9NYU1 1516 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 GYG2O15488 501 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 TMPRSS15P98073 1019 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 RNASELQ05823 741 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 AIFM3Q96NN9 605 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 PIGSQ96S52 555 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 CHL1O00533 1208 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 DDAH1O94760 285 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 LARGE1O95461 756 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 CASP1P29466 404 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 NEK9Q8TD19 979 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 EIF2AQ9BY44 585 aaKnown RBP12.31□□□□□ -0.44
SEC16A-206ENST00000431893 PITPNM3Q9BZ71 974 aa12.31□□□□□ -0.44
SEC16A-206ENST00000431893 NCK2O43639 380 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 PRKAB2O43741 272 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 SEC24DO94855 1032 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ATP1A3P13637 1013 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 MTERF2Q49AM1 385 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEC16A-206ENST00000431893 TTC7AQ9ULT0 858 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ITM2BQ9Y287 266 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 PALMO75781 387 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 FGGP02679 453 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ZNF507Q8TCN5 953 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ECT2Q9H8V3 914 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 CYP4F11Q9HBI6 524 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 POLD4Q9HCU8 107 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ZNF711Q9Y462 761 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 PTPRKQ15262 1439 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 SUPT3HO75486 399 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 PMLP29590 882 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ARL4AP40617 200 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 CTTNQ14247 550 aaKnown RBP12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ACCSQ96QU6 501 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 AS3MTQ9HBK9 375 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ZFP69BQ9UJL9 534 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 NDUFA10O95299 355 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 FAM160B1Q5W0V3 765 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 GREM2Q9H772 168 aa12.3□□□□□ -0.44
SEC16A-206ENST00000431893 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
SEC16A-206ENST00000431893 NOC2LQ9Y3T9 749 aaKnown RBP12.3□□□□□ -0.44
SEC16A-206ENST00000431893 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms