RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SMARCA1P28370 1054 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 HOXC8P31273 242 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MRPS9P82933 396 aaKnown RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 COL9A3Q14050 684 aaPredicted RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TRIM71Q2Q1W2 868 aaKnown RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 HERC6Q8IVU3 1022 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 GPKOWQ92917 476 aaPredicted RBP eCLIP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SPATA33Q96N06 139 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LSG1Q9H089 658 aaKnown RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PRDM6Q9NQX0 595 aa10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SH2B2O14492 632 aaPredicted RBP10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PRC1O43663 620 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 NBNO60934 754 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 STAM2O75886 525 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ICAM3P32942 547 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 KIF5BP33176 963 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PTK7Q13308 1070 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 HIC1Q14526 733 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ATXN2LQ8WWM7 1075 aaKnown RBP10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SYMPKQ92797 1274 aaKnown RBP10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 WNT8BQ93098 351 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 C16orf70Q9BSU1 422 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ALG1Q9BT22 464 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MYL10Q9BUA6 226 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PTPRSQ13332 1948 aa10.87□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SPATA31C2B4DYI2 1134 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MEIS2O14770 477 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SLC27A2O14975 620 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SORBS3O60504 671 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ARHGEF15O94989 841 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 POU3F3P20264 500 aaPredicted RBP10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 IGFBP4P22692 258 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MCM5P33992 734 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 WDR5P61964 334 aaKnown RBP10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TAP1Q03518 808 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SEMA3FQ13275 785 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MBTPS1Q14703 1052 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TCTN1Q2MV58 587 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 GNPTABQ3T906 1256 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CNKSR3Q6P9H4 555 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 METTL7BQ6UX53 244 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SERINC5Q86VE9 423 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PPM1EQ8WY54 764 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 RRP36Q96EU6 259 aaKnown RBP10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TMEM87BQ96K49 555 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LZTS2Q9BRK4 669 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ESYT1Q9BSJ8 1104 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 THEGQ9P2T0 379 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 NCOR1O75376 2440 aa10.86□□□□□ -0.67
CDC42-IT1-201ENST00000431803 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 FIBPO43427 364 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PLEKHA8P1O95397 391 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LGALS2P05162 132 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LIFRP42702 1097 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 KCNJ6P48051 423 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 NEDD9Q14511 834 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 NECTIN1Q15223 517 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ZNF618Q5T7W0 954 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PCNX4Q63HM2 1172 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 XRRA1Q6P2D8 792 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 USP17L6PQ6QN14 398 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CASC1Q6TDU7 716 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TMTC2Q8N394 836 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SRBD1Q8N5C6 995 aaKnown RBP10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PIBF1Q8WXW3 757 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ASB2Q96Q27 587 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 MLXIPQ9HAP2 919 aa10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SEC63Q9UGP8 760 aaKnown RBP10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 PRRC2BQ5JSZ5 2229 aaKnown RBP10.85□□□□□ -0.67
CDC42-IT1-201ENST00000431803 ABHD14A-ACY1A0A1B0GW23 586 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 KIF28PB7ZC32 967 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 H3BRB1 525 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 NOP56O00567 594 aaKnown RBP10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 TLL1O43897 1013 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 RNF40O75150 1001 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SMIM10L2AP0DMW4 78 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SMIM10L2BP0DMW5 78 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 GNAQP50148 359 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 DEFB103AP81534 67 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CCDC85BQ15834 202 aaPredicted RBP10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 BMP2KLQ5H9B9 411 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 CYFIP1Q7L576 1253 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 SGMS1Q86VZ5 419 aa10.84□□□□□ -0.67
CDC42-IT1-201ENST00000431803 GPR20Q99678 358 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms