RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RPA1P27694 616 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 ICAM3P32942 547 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
HMGN1-206ENST00000431390 PRMT2P55345 433 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 ITGB3BPQ13352 177 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-206ENST00000431390 PNOCQ13519 176 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 MTFR1Q15390 333 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 ZRSR1Q15695 479 aaKnown RBP20.44■□□□□ 0.86
HMGN1-206ENST00000431390 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 GAS2L3Q86XJ1 694 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 KCTD17Q8N5Z5 321 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 MORC4Q8TE76 937 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 POLR3CQ9BUI4 534 aaPredicted RBP20.44■□□□□ 0.86
HMGN1-206ENST00000431390 CEP290O15078 2479 aa20.44■□□□□ 0.86
HMGN1-206ENST00000431390 SPATA31C2B4DYI2 1134 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 MYL1P05976 194 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 ADORA2AP29274 412 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 TYRO3Q06418 890 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 SEMA3FQ13275 785 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 GRB14Q14449 540 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 UNC45AQ9H3U1 944 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 KBTBD4Q9NVX7 518 aa20.43■□□□□ 0.86
HMGN1-206ENST00000431390 NFASCO94856 1347 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 ASB14A6NK59 587 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 MUTP22033 750 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 PSMC4P43686 418 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 ZNF792Q3KQV3 632 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 NT5DC1Q5TFE4 455 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 NEK9Q8TD19 979 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 TRIM47Q96LD4 638 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 PLIN2Q99541 437 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 DIS3Q9Y2L1 958 aaKnown RBP20.42■□□□□ 0.86
HMGN1-206ENST00000431390 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 FSD2A1L4K1 749 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 SLC15A5A6NIM6 579 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 EML1O00423 815 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 GTPBP6O43824 516 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-206ENST00000431390 MED24O75448 989 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 AFMP43652 599 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 EPHA7Q15375 998 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 ZNF467Q7Z7K2 595 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-206ENST00000431390 GRAMD1CQ8IYS0 662 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 SPATA20Q8TB22 786 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 LRRC15Q8TF66 581 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 ERCC4Q92889 916 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-206ENST00000431390 EIF2AK1Q9BQI3 630 aaKnown RBP20.42■□□□□ 0.86
HMGN1-206ENST00000431390 TUFT1Q9NNX1 390 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 BLOC1S4Q9NUP1 217 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 SRRDQ9UH36 339 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 TCEAL9Q9UHQ7 104 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 PCDHA5Q9Y5H7 936 aa20.42■□□□□ 0.86
HMGN1-206ENST00000431390 GOLGA6L3A6NEY3 463 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 CHMP2AO43633 222 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 ATP9AO75110 1047 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 SMC2O95347 1197 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 KCNA2P16389 499 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 SARSP49591 514 aaKnown RBP20.41■□□□□ 0.86
HMGN1-206ENST00000431390 KRT76Q01546 638 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 DPYDQ12882 1025 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 ECM1Q16610 540 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 STX1AQ16623 288 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 CHRDL2Q6WN34 429 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 CATSPER3Q86XQ3 398 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 LARP4BQ92615 738 aaKnown RBP20.41■□□□□ 0.86
HMGN1-206ENST00000431390 RAD54LQ92698 747 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 SMARCE1Q969G3 411 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 MTRQ99707 1265 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 HSD17B14Q9BPX1 270 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 ANO10Q9NW15 660 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 PKD2L1Q9P0L9 805 aa20.41■□□□□ 0.86
HMGN1-206ENST00000431390 MCM3APO60318 1980 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 POTEB3A0JP26 581 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 COBLO75128 1261 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 SPATA31C1P0DKV0 1188 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 SFNP31947 248 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 AMPD3Q01432 767 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 POTEBQ6S5H4 581 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 RDM1Q8NG50 284 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 SENP7Q9BQF6 1050 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 LOXHD1Q8IVV2 1947 aa20.4■□□□□ 0.86
HMGN1-206ENST00000431390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-206ENST00000431390 DDX39AO00148 427 aaKnown RBP20.39■□□□□ 0.85
HMGN1-206ENST00000431390 CAVIN2O95810 425 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 TGFB3P10600 412 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 GRK4P32298 578 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 JAK3P52333 1124 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 ZNF746Q6NUN9 644 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-206ENST00000431390 KCNV1Q6PIU1 500 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 SV2BQ7L1I2 683 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 MIER3Q7Z3K6 550 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 TRIML1Q8N9V2 468 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 RAET1EQ8TD07 263 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 DPF3Q92784 378 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 GSDMAQ96QA5 445 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 LRRC27Q9C0I9 530 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 SLC5A4Q9NY91 659 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 KIAA1024Q9UPX6 916 aa20.39■□□□□ 0.85
HMGN1-206ENST00000431390 NLRP12P59046 1061 aa20.38■□□□□ 0.85
HMGN1-206ENST00000431390 KCNK18Q7Z418 384 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms