RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 BATF3Q9NR55 127 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 EURLQ9NYK6 297 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 SH3GLB1Q9Y371 365 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 C9IYK1 514 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ZPR1O75312 459 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 S100A6P06703 90 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 EPB41P11171 864 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 SLCO1A2P46721 670 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 IFNAR2P48551 515 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 CDK17Q00537 523 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 BFSP1Q12934 665 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ATP13A4Q4VNC1 1196 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 FOXR1Q6PIV2 292 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF600Q6ZNG1 722 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 PNMA8AQ86V59 439 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 NBPF15Q8N660 670 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 PDE11AQ9HCR9 933 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 BRD7Q9NPI1 651 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ATP8A2Q9NTI2 1148 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 SAP30BPQ9UHR5 308 aaKnown RBP5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ERVK-19Q9WJR5 959 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 FPGT-TNNI3KV9GXZ4 949 aa5.82□□□□□ -1.48
PTPN4-203ENST00000430976 ARHGAP10A1A4S6 786 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PRRT4C9JH25 899 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 RAD51BO15315 384 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SYNCRIPO60506 623 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CLASP2O75122 1294 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 MAP3K6O95382 1288 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KRT75O95678 551 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GLAP06280 429 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CD9P21926 228 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GPTP24298 496 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GBE1Q04446 702 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KCTD21Q4G0X4 260 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CNNM4Q6P4Q7 775 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ZNF527Q8NB42 609 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CCHCR1Q8TD31 782 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PMEPA1Q969W9 287 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 NMD3Q96D46 503 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CDCA7LQ96GN5 454 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SLC26A6Q9BXS9 759 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SAGE1Q9NXZ1 904 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SEC63Q9UGP8 760 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PYCARDQ9ULZ3 195 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 IPPQ9Y573 584 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 RAB19A4D1S5 217 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ATP1A3P13637 1013 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 LONP1P36776 959 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 NUP62P37198 522 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ARL1P40616 181 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SARSP49591 514 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ATXN3P54252 364 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 OXCT1P55809 520 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GABREP78334 506 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CYP4F8P98187 520 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 RUNX1T1Q06455 604 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 BMPR2Q13873 1038 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PLEKHO1Q53GL0 409 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 HS2ST1Q7LGA3 356 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CPLX4Q7Z7G2 160 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SPICE1Q8N0Z3 855 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SPERTQ8NA61 448 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GDAP1Q8TB36 358 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 MAIP1Q8WWC4 291 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 HAUS1Q96CS2 278 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 NTN4Q9HB63 628 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 NEK6Q9HC98 313 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PCDH18Q9HCL0 1135 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 VCX3AQ9NNX9 186 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 BECN2A8MW95 431 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 VAMP4O75379 141 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 YEATS4O95619 227 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GAS8O95995 478 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 DNTTP04053 509 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CHGBP05060 677 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 GUCY1A2P33402 732 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 NPTX2P47972 431 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 AMPHP49418 695 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 COPB1P53618 953 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 TRIM25Q14258 630 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PTK2BQ14289 1009 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 ERCC6LQ2NKX8 1250 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC153Q494R4 210 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 IYDQ6PHW0 289 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CEP68Q76N32 757 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PALM2Q8IXS6 379 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 NFATC2IPQ8NCF5 419 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 DEPTORQ8TB45 409 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 OSBP2Q969R2 916 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 KIAA1143Q96AT1 154 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 CRLF2Q9HC73 371 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SLC35C2Q9NQQ7 365 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 PARVAQ9NVD7 372 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 QPCTLQ9NXS2 382 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 SRP68Q9UHB9 627 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 HERC5Q9UII4 1024 aaKnown RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 MTF2Q9Y483 593 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-203ENST00000430976 A0A1B0GVG6 124 aa5.81□□□□□ -1.48
PTPN4-203ENST00000430976 VPS37CA5D8V6 355 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms