RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TIMM10P62072 90 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PHEXP78562 749 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 TFAMQ00059 246 aaKnown RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 DEUP1Q05D60 604 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 BZW1Q7L1Q6 419 aaKnown RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 TEKT4Q8WW24 435 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ATP2A3Q93084 1043 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF594Q96JF6 807 aaPredicted RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PTPN23Q9H3S7 1636 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 TIAM1Q13009 1591 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 KDM6AO15550 1401 aaPredicted RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PDHXO00330 501 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF197O14709 1029 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 POLR2DO15514 142 aaKnown RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PYGMP11217 842 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 CYP2C19P33261 490 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PPP1R7Q15435 360 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 CCNG2Q16589 344 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 CCDC144BQ3MJ40 725 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PPP2R2DQ66LE6 453 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF438Q7Z4V0 828 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PLEKHM2Q8IWE5 1019 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 SLC44A5Q8NCS7 719 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 TTC14Q96N46 770 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 SMC6Q96SB8 1091 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ZSCAN10Q96SZ4 725 aaPredicted RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 TRAIPQ9BWF2 469 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 SPATA16Q9BXB7 569 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 TRIM7Q9C029 511 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ECT2Q9H8V3 914 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 LGR6Q9HBX8 967 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 SAMD15Q9P1V8 674 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 MTRF1LQ9UGC7 380 aaKnown RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 PA2G4Q9UQ80 394 aaKnown RBP4.9□□□□□ -1.62
LRRK2-204ENST00000430804 KDRP35968 1356 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 HEG1Q9ULI3 1381 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 SYNJ2BP-COX16A0A087WUM0 186 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 B4E1Z4 1266 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 UBXN8O00124 270 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 KIF2AO00139 706 aaPredicted RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CIAO1O76071 339 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 HMGCRP04035 888 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CYP2C9P11712 490 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 RAB27AP51159 221 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CASP6P55212 293 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 RPL10AP62906 217 aaKnown RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 ARHGEF7Q14155 803 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 MAPRE1Q15691 268 aaKnown RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 SYCP2LQ5T4T6 812 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CYP26C1Q6V0L0 522 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 STAG1Q8WVM7 1258 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 UPF1Q92900 1129 aaKnown RBP eCLIP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 HPS3Q969F9 1004 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 KIAA1586Q9HCI6 787 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 DDX19AQ9NUU7 478 aaKnown RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 COX16Q9P0S2 106 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 ATP2C2O75185 946 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 ADCY1Q08828 1119 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 MTMR2Q13614 643 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 PDIA6Q15084 440 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 FAM47AQ5JRC9 791 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 PPP4R4Q6NUP7 873 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 ZNF365Q70YC5 407 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 SDCCAG8Q86SQ7 713 aaPredicted RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CRACR2AQ9BSW2 395 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 IFIH1Q9BYX4 1025 aaKnown RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 PPANQ9NQ55 473 aaKnown RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 RPRD1BQ9NQG5 326 aaKnown RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 SPACA6W5XKT8 324 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CNTNAP4Q9C0A0 1308 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CLGNO14967 610 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 ALPPL2P10696 532 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 HOXA7P31268 230 aaPredicted RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 TTC31Q49AM3 519 aaPredicted RBP4.9□□□□□ -1.63
LRRK2-204ENST00000430804 TBC1D9BQ66K14 1250 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 CYB5D1Q6P9G0 228 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 NEK9Q8TD19 979 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 HSPH1Q92598 858 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 ATP6V1E2Q96A05 226 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 TNIP3Q96KP6 325 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 DEFB118Q96PH6 123 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 TRIM54Q9BYV2 358 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 MAD1L1Q9Y6D9 718 aa4.9□□□□□ -1.63
LRRK2-204ENST00000430804 FGF19O95750 216 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 CAVIN2O95810 425 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 RALBP11234 206 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 KPNA2P52292 529 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 OXCT1P55809 520 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 AP3B2Q13367 1082 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 FAM83BQ5T0W9 1011 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 MYSM1Q5VVJ2 828 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ANKS6Q68DC2 871 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NLRP10Q86W26 655 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 CCHCR1Q8TD31 782 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 DPF2Q92785 391 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 DHX58Q96C10 678 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 DDX27Q96GQ7 796 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NUP85Q9BW27 656 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NFKBIZQ9BYH8 718 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms