RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 EMSYQ7Z589 1322 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 POTEMA6NI47 508 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 DYNC1LI2O43237 492 aaPredicted RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 SORBS3O60504 671 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 ADAMTS4O75173 837 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 PSAPP07602 524 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 CAPN2P17655 700 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 CST5P28325 142 aaPredicted RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 MARCKSP29966 332 aaPredicted RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 LONP1P36776 959 aaKnown RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 TXLNAP40222 546 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 TECP42680 631 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 ME1P48163 572 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 ACTR2P61160 394 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 NKX3-2P78367 333 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 SPIRE1Q08AE8 756 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 DGKDQ16760 1214 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 RNF180Q86T96 592 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 IGSF22Q8N9C0 903 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 GPR20Q99678 358 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 DISC1Q9NRI5 854 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 FBXO2Q9UK22 296 aaPredicted RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 ZNF215Q9UL58 517 aaPredicted RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 PCDHA10Q9Y5I2 948 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 SRPRBQ9Y5M8 271 aaKnown RBP12.38□□□□□ -0.43
CHD4-202ENST00000430771 WDR81Q562E7 1941 aa12.38□□□□□ -0.43
CHD4-202ENST00000430771 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 GOLGA6L22H0YM25 854 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 BACH1O14867 736 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 KPNA6O60684 536 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHD4-202ENST00000430771 CUTAO60888 179 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 CCNE2O96020 404 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
CHD4-202ENST00000430771 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 HOXD8P13378 290 aaPredicted RBP12.37□□□□□ -0.43
CHD4-202ENST00000430771 TCF7P36402 384 aaPredicted RBP12.37□□□□□ -0.43
CHD4-202ENST00000430771 EPHA7Q15375 998 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 HSDL1Q3SXM5 330 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 TMEM63BQ5T3F8 832 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 FAM160B1Q5W0V3 765 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
CHD4-202ENST00000430771 SEPT1Q8WYJ6 367 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 ATP6V0A1Q93050 837 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 DEFB118Q96PH6 123 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 TMEM106CQ9BVX2 250 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 KATNAL1Q9BW62 490 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 AZI2Q9H6S1 392 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 LRWD1Q9UFC0 647 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 RCOR1Q9UKL0 485 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 MYH9P35579 1960 aaKnown RBP12.37□□□□□ -0.43
CHD4-202ENST00000430771 IGSF9BQ9UPX0 1349 aa12.37□□□□□ -0.43
CHD4-202ENST00000430771 HTTP42858 3142 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 A6NJR5 290 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 SLC26A4O43511 780 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 PGK1P00558 417 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 LGALS2P05162 132 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 GJB1P08034 283 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 PDIA5Q14554 519 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 CLEC17AQ6ZS10 378 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
CHD4-202ENST00000430771 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 ARRDC4Q8NCT1 418 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
CHD4-202ENST00000430771 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
CHD4-202ENST00000430771 MYADML2A6NDP7 307 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 GOLGA6L4A6NEF3 574 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 MOXD2PA6NHM9 499 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 DNM1LO00429 736 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 LGR5O75473 907 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 ATG7O95352 703 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
CHD4-202ENST00000430771 MYL3P08590 195 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 MUTP22033 750 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 PTGS1P23219 599 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 UBA7P41226 1012 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 SLC26A2P50443 739 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 BEX3Q00994 111 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 LRRC41Q15345 812 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
CHD4-202ENST00000430771 COL13A1Q5TAT6 717 aaPredicted RBP12.35□□□□□ -0.43
CHD4-202ENST00000430771 LHX8Q68G74 356 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 CCDC60Q8IWA6 550 aaPredicted RBP12.35□□□□□ -0.43
CHD4-202ENST00000430771 KLHDC9Q8NEP7 349 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 GLG1Q92896 1179 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 CDK5RAP3Q96JB5 506 aa12.35□□□□□ -0.43
CHD4-202ENST00000430771 FAM167AQ96KS9 214 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms