RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 ENPP3O14638 875 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 FIBPO43427 364 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 PPP1R11O60927 126 aaPredicted RBP11.88□□□□□ -0.51
OPTN-208ENST00000430081 CHRNA1P02708 482 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 MMP1P03956 469 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 ICAM3P32942 547 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 ADAM15Q13444 863 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 TRIM67Q6ZTA4 783 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 LMBR1Q8WVP7 490 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 CLP1Q92989 425 aaKnown RBP11.88□□□□□ -0.51
OPTN-208ENST00000430081 MTMR8Q96EF0 704 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 SNX27Q96L92 541 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 BCAS3Q9H6U6 928 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
OPTN-208ENST00000430081 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
OPTN-208ENST00000430081 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 PALM3A6NDB9 673 aaPredicted RBP11.87□□□□□ -0.51
OPTN-208ENST00000430081 LINC01565O15544 149 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 ST18O60284 1047 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 TBX10O75333 385 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.51
OPTN-208ENST00000430081 SP4Q02446 784 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 NAALADL2Q58DX5 795 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
OPTN-208ENST00000430081 TRIM50Q86XT4 487 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 PRSS33Q8NF86 280 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 MAD2L2Q9UI95 211 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 PLAGL2Q9UPG8 496 aa11.87□□□□□ -0.51
OPTN-208ENST00000430081 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 HIP1O00291 1037 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 DGKIO75912 1065 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 EYA4O95677 639 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 ADAM17P78536 824 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 MRPS9P82933 396 aaKnown RBP11.86□□□□□ -0.51
OPTN-208ENST00000430081 ZXDAP98168 799 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 LPIN1Q14693 890 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 NLRX1Q86UT6 975 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 EFHBQ8N7U6 833 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 GIMAP8Q8ND71 665 aaPredicted RBP11.86□□□□□ -0.51
OPTN-208ENST00000430081 P2RX5Q93086 422 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 ZNF689Q96CS4 500 aaPredicted RBP11.86□□□□□ -0.51
OPTN-208ENST00000430081 INPP4AQ96PE3 977 aaPredicted RBP11.86□□□□□ -0.51
OPTN-208ENST00000430081 PIGSQ96S52 555 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 EHMT1Q9H9B1 1298 aa11.86□□□□□ -0.51
OPTN-208ENST00000430081 PNMA6FA0A0J9YX94 578 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 MGAT3Q09327 533 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 TRDNQ13061 729 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 PPFIA1Q13136 1202 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
OPTN-208ENST00000430081 IER5LQ5T953 404 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 RUFY4Q6ZNE9 571 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 TSHZ1Q6ZSZ6 1077 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 CMTR2Q8IYT2 770 aaKnown RBP11.85□□□□□ -0.51
OPTN-208ENST00000430081 POF1BQ8WVV4 589 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 CUL5Q93034 780 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 MSLNLQ96KJ4 702 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 IRF2BPLQ9H1B7 796 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 RIOX1Q9H6W3 641 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 SUPT16HQ9Y5B9 1047 aaKnown RBP11.85□□□□□ -0.51
OPTN-208ENST00000430081 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
OPTN-208ENST00000430081 ERICH2A1L162 156 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 LOC730098B7Z3J9 87 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
OPTN-208ENST00000430081 STAG3L1P0CL83 205 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
OPTN-208ENST00000430081 NRIP1P48552 1158 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 COASYQ13057 564 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 GRM4Q14833 912 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 SEC23AQ15436 765 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 GRIK4Q16099 956 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 IER5Q5VY09 327 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 RBM23Q86U06 439 aaKnown RBP11.84□□□□□ -0.51
OPTN-208ENST00000430081 NPAS4Q8IUM7 802 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 SPPL3Q8TCT6 385 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 MICAL1Q8TDZ2 1067 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 DNAJB3Q8WWF6 145 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 GLG1Q92896 1179 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
OPTN-208ENST00000430081 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 MRPL42Q9Y6G3 142 aaKnown RBP11.84□□□□□ -0.51
OPTN-208ENST00000430081 FRMPD4Q14CM0 1322 aa11.84□□□□□ -0.51
OPTN-208ENST00000430081 M0QZ92 97 aa11.83□□□□□ -0.52
OPTN-208ENST00000430081 ITGB1P05556 798 aa11.83□□□□□ -0.52
OPTN-208ENST00000430081 DNAJB1P25685 340 aa11.83□□□□□ -0.52
OPTN-208ENST00000430081 MARK3P27448 753 aa11.83□□□□□ -0.52
OPTN-208ENST00000430081 CD52P31358 61 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms