RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SMIM10L2AP0DMW4 78 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SMIM10L2BP0DMW5 78 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SELPP16109 830 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 RBL2Q08999 1139 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SCRN1Q12765 414 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 PTK7Q13308 1070 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 LRRC8DQ7L1W4 858 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
UBE3D-204ENST00000430071 NLRX1Q86UT6 975 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 NECAB1Q8N987 351 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 AFAP1L1Q8TED9 768 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 GPRASP2Q96D09 838 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SENP7Q9BQF6 1050 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 SLKQ9H2G2 1235 aaPredicted RBP19.37■□□□□ 0.69
UBE3D-204ENST00000430071 PRDM12Q9H4Q4 367 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 BARHL2Q9NY43 387 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 LIMCH1Q9UPQ0 1083 aa19.37■□□□□ 0.69
UBE3D-204ENST00000430071 ST18O60284 1047 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 ARHGEF15O94989 841 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 HOXC8P31273 242 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 RFC2P35250 354 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 PHKBQ93100 1093 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 ANO3Q9BYT9 981 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 MTIF3Q9H2K0 278 aaKnown RBP19.36■□□□□ 0.69
UBE3D-204ENST00000430071 JADE2Q9NQC1 790 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 SETD4Q9NVD3 440 aa19.36■□□□□ 0.69
UBE3D-204ENST00000430071 PFKMP08237 780 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 ARP10275 920 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 FOSL2P15408 326 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 ATP2A2P16615 1042 aaKnown RBP19.35■□□□□ 0.69
UBE3D-204ENST00000430071 IFNAR1P17181 557 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 CLK2P49760 499 aaKnown RBP19.35■□□□□ 0.69
UBE3D-204ENST00000430071 ADCY7P51828 1080 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 ST3GAL1Q11201 340 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 PFKFB3Q16875 520 aaPredicted RBP19.35■□□□□ 0.69
UBE3D-204ENST00000430071 SERINC5Q86VE9 423 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 MAFAQ8NHW3 353 aaPredicted RBP19.35■□□□□ 0.69
UBE3D-204ENST00000430071 UIMC1Q96RL1 719 aa19.35■□□□□ 0.69
UBE3D-204ENST00000430071 C17orf102A2RUQ5 167 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 DTNBO60941 627 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 TCF7P36402 384 aaPredicted RBP19.34■□□□□ 0.69
UBE3D-204ENST00000430071 MTMR1Q13613 665 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 ADGRE1Q14246 886 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 JAKMIP3Q5VZ66 844 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 SPRED2Q7Z698 418 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 USP38Q8NB14 1042 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 IL27Q8NEV9 243 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 ATP6V0A1Q93050 837 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 GTF3C6Q969F1 213 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 PCYT2Q99447 389 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 MXRA8Q9BRK3 442 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 MSRAQ9UJ68 235 aa19.34■□□□□ 0.69
UBE3D-204ENST00000430071 CXCL10P02778 98 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 SCG2P13521 617 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 ADAM17P78536 824 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 DEFB103AP81534 67 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 RAB30Q15771 203 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 PPP1R18Q6NYC8 613 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 CCDC155Q8N6L0 562 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 KCNH7Q9NS40 1196 aa19.33■□□□□ 0.69
UBE3D-204ENST00000430071 CPLX1O14810 134 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 PRPF3O43395 683 aaKnown RBP19.32■□□□□ 0.68
UBE3D-204ENST00000430071 CTDNEP1O95476 244 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 MARK3P27448 753 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 THPOP40225 353 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 ZBTB10Q96DT7 871 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-204ENST00000430071 BRWD1Q9NSI6 2320 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 ACTN1P12814 892 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 WDR5P61964 334 aaKnown RBP19.32■□□□□ 0.68
UBE3D-204ENST00000430071 ITGB3BPQ13352 177 aaPredicted RBP19.32■□□□□ 0.68
UBE3D-204ENST00000430071 RASGRP4Q8TDF6 673 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 LMBR1Q8WVP7 490 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 SEPT1Q8WYJ6 367 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 SLC26A6Q9BXS9 759 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 CERS4Q9HA82 394 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 SLC28A3Q9HAS3 691 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 PCDHA11Q9Y5I1 949 aa19.32■□□□□ 0.68
UBE3D-204ENST00000430071 MYO7AQ13402 2215 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 COL4A4P53420 1690 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-204ENST00000430071 NLRC5Q86WI3 1866 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 hCG_1984214I3L0E3 225 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 RFXAPO00287 272 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 EDIL3O43854 480 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 CA3P07451 260 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 CTSHP09668 335 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 SREBF1P36956 1147 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 ARHGAP4P98171 946 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 RUFY4Q6ZNE9 571 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 HERC6Q8IVU3 1022 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 ZNF713Q8N859 430 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-204ENST00000430071 GIMAP8Q8ND71 665 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-204ENST00000430071 TMX3Q96JJ7 454 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 RNF26Q9BY78 433 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-204ENST00000430071 PRDM6Q9NQX0 595 aa19.31■□□□□ 0.68
UBE3D-204ENST00000430071 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
UBE3D-204ENST00000430071 TCF20Q9UGU0 1960 aaKnown RBP19.3■□□□□ 0.68
UBE3D-204ENST00000430071 LCHNA4D1U4 455 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 EPOPA6NHQ4 379 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 FAM86B1E9PN63 330 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms