RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
PTCH1-207ENST00000429896 MAP9Q49MG5 647 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 VWA3BQ502W6 1294 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 CYFIP1Q7L576 1253 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 MCPH1Q8NEM0 835 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 ERO1AQ96HE7 468 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 KIF2AO00139 706 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-207ENST00000429896 ZNF445P59923 1031 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 PIGOQ8TEQ8 1089 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 SLFN14P0C7P3 912 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
PTCH1-207ENST00000429896 SNX16P57768 344 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 SSX2IPQ9Y2D8 614 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 PHLPP2Q6ZVD8 1323 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 MTRQ99707 1265 aa14.18□□□□□ -0.14
PTCH1-207ENST00000429896 N4BP1O75113 896 aaKnown RBP14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TSNARE1Q96NA8 513 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TAAR1Q96RJ0 339 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 NFE2L3Q9Y4A8 694 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 FZD9O00144 591 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 RPS6P62753 249 aaKnown RBP14.17□□□□□ -0.14
PTCH1-207ENST00000429896 RNASELQ05823 741 aaKnown RBP14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TROAPQ12815 778 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 ADAM9Q13443 819 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 ALCAMQ13740 583 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 SAMD3Q8N6K7 520 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 GOLGA1Q92805 767 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 ASCC2Q9H1I8 757 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-207ENST00000429896 DLG5Q8TDM6 1919 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 C4BP0C0L5 1744 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 STAM2O75886 525 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 CATSPER4Q7RTX7 472 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 SCFD2Q8WU76 684 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 EPSTI1Q96J88 318 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 AGTPBP1Q9UPW5 1226 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 ZNF280AP59817 542 aaPredicted RBP14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
PTCH1-207ENST00000429896 CCDC42Q96M95 316 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 GSDMAQ96QA5 445 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TAB2Q9NYJ8 693 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 PHKA2P46019 1235 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 CCDC63Q8NA47 563 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 NOX5Q96PH1 765 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 SPATC1LQ9H0A9 340 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 ZKSCAN5Q9Y2L8 839 aa14.17□□□□□ -0.14
PTCH1-207ENST00000429896 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 NOGQ13253 232 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 EPHA7Q15375 998 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 PADI6Q6TGC4 694 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 GJA10Q969M2 543 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 DLATP10515 647 aaKnown RBP14.16□□□□□ -0.14
PTCH1-207ENST00000429896 BCRP11274 1271 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 FERP16591 822 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 STAT5BP51692 787 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 MTMR14Q8NCE2 650 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 P2RX7Q99572 595 aaKnown RBP14.16□□□□□ -0.14
PTCH1-207ENST00000429896 LXNQ9BS40 222 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 TRPA1O75762 1119 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 CCDC175P0C221 793 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 TRIM14Q14142 442 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 GSTA5Q7RTV2 222 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 METTL14Q9HCE5 456 aaKnown RBP14.16□□□□□ -0.14
PTCH1-207ENST00000429896 SYNPO2Q9UMS6 1093 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
PTCH1-207ENST00000429896 CPT1AP50416 773 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 MXRA7P84157 204 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 MORC3Q14149 939 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 ZBTB33Q86T24 672 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 EHBP1Q8NDI1 1231 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 DDX23Q9BUQ8 820 aaKnown RBP14.16□□□□□ -0.14
PTCH1-207ENST00000429896 ARMCX3Q9UH62 379 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-207ENST00000429896 IKBKGQ9Y6K9 419 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 SOCS7O14512 581 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 CYP2C8P10632 490 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 CAPZA3Q96KX2 299 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 FERMT1Q9BQL6 677 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
PTCH1-207ENST00000429896 MAFGO15525 162 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 GPIHBP1Q8IV16 184 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 MXRA8Q9BRK3 442 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 GOLGA6L9A6NEM1 432 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 VWA5AO00534 786 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
PTCH1-207ENST00000429896 SNW1Q13573 536 aaKnown RBP14.15□□□□□ -0.14
PTCH1-207ENST00000429896 MOB2Q70IA6 237 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 RNF180Q86T96 592 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 SEPT1Q8WYJ6 367 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 GBP3Q9H0R5 595 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 SMARCAD1Q9H4L7 1026 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 TNFAIP3P21580 790 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 PSMD2Q13200 908 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 SEC23AQ15436 765 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 MMS19Q96T76 1030 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 EIF2AK1Q9BQI3 630 aaKnown RBP14.15□□□□□ -0.14
PTCH1-207ENST00000429896 ZMYND12Q9H0C1 365 aa14.15□□□□□ -0.14
PTCH1-207ENST00000429896 PRDM5Q9NQX1 630 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms