RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 TROVE2P10155 538 aaKnown RBP eCLIP4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 NR1D1P20393 614 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 TUBB2AQ13885 445 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 CNGA3Q16281 694 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 SLC44A4Q53GD3 710 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 CYP26C1Q6V0L0 522 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 CCDC73Q6ZRK6 1079 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 RAB11FIP4Q86YS3 637 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 FMR1NBQ8N0W7 255 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 C1orf131Q8NDD1 294 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 STKLD1Q8NE28 680 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 ENOX1Q8TC92 643 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 FAM20AQ96MK3 541 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 PANX2Q96RD6 677 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 TCF12Q99081 682 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 HGH1Q9BTY7 390 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 TUBB2BQ9BVA1 445 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 ARHGEF3Q9NR81 526 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 FAIMQ9NVQ4 179 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 CNOT8Q9UFF9 292 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 CEP131Q9UPN4 1083 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 CARD8Q9Y2G2 431 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 DLG5Q8TDM6 1919 aa4.78□□□□□ -1.64
R3HDM1-206ENST00000429703 MYO5AQ9Y4I1 1855 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 RGPD3A6NKT7 1758 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 RGPD4Q7Z3J3 1758 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 GMNCA6NCL1 334 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CCT8L1PA6NM43 557 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 IFIT3O14879 490 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 PLSCR1O15162 318 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 KDM1AO60341 852 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 MGEA5O60502 916 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CLASP2O75122 1294 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ATP2C2O75185 946 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 WFS1O76024 890 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 TPBGLP0DKB5 382 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 GRIA2P42262 883 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 SERPINB4P48594 390 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 PEX5P50542 639 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ADKP55263 362 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 RESTQ13127 1097 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 PAK2Q13177 524 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CYP4A22Q5TCH4 519 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 WDR78Q5VTH9 848 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 PPP4R3AQ6IN85 833 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 NAA16Q6N069 864 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CAPN12Q6ZSI9 719 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CEP128Q6ZU80 1094 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 PNMA8AQ86V59 439 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 UNC5CLQ8IV45 518 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CD302Q8IX05 232 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 LINC00469Q8N7U9 141 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CCDC63Q8NA47 563 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ANKLE1Q8NAG6 615 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ASAP3Q8TDY4 903 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 SH3TC2Q8TF17 1288 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 GAB3Q8WWW8 586 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ATP6V0A1Q93050 837 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CCT7Q99832 543 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 FAM192AQ9GZU8 254 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CABP1Q9NZU7 370 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 MAGEC2Q9UBF1 373 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 FAM198AQ9UFP1 575 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 LIMCH1Q9UPQ0 1083 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 NUMBLQ9Y6R0 609 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ITSN1Q15811 1721 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 POTEFA5A3E0 1075 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CFAP73A6NFT4 308 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 WNT7AO00755 349 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 RNF113AO15541 343 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 KCNJ13O60928 360 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ASMTLO95671 621 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 GSTA2P09210 222 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CDK4P11802 303 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 KCNA6P17658 529 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ARFIP2P53365 341 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 AKAP17AQ02040 695 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 GUCY2DQ02846 1103 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 VAC14Q08AM6 782 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 MTX1Q13505 466 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 RASA2Q15283 850 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 PCSK7Q16549 785 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 GLE1Q53GS7 698 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 IRGCQ6NXR0 463 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ARHGEF18Q6ZSZ5 1173 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 RASGRP2Q7LDG7 609 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 LSMEM2Q8N112 164 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 VPS52Q8N1B4 723 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ANKS4BQ8N8V4 417 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 EHBP1Q8NDI1 1231 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 CAVIN3Q969G5 261 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 ZNF333Q96JL9 665 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 DNAJC1Q96KC8 554 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 SIKE1Q9BRV8 207 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 SCAND2PQ9GZW5 306 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 NRDE2Q9H7Z3 1164 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 LRRC4CQ9HCJ2 640 aa4.77□□□□□ -1.65
R3HDM1-206ENST00000429703 HMX1Q9NP08 348 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms