RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 APOBRQ0VD83 1088 aa17.34■□□□□ 0.37
MDM2-215ENST00000428863 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.34■□□□□ 0.379e-8■■□□□ 11.5
MDM2-215ENST00000428863 Q6ZUG5 572 aa17.34■□□□□ 0.37
MDM2-215ENST00000428863 DBF4BQ8NFT6 615 aa17.34■□□□□ 0.37
MDM2-215ENST00000428863 TMEM260Q9NX78 707 aa17.34■□□□□ 0.37
MDM2-215ENST00000428863 SPTBN5Q9NRC6 3674 aaKnown RBP17.34■□□□□ 0.37
MDM2-215ENST00000428863 SIP14410 1827 aa17.33■□□□□ 0.37
MDM2-215ENST00000428863 TLL1O43897 1013 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 NAPAP54920 295 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 MTMR1Q13613 665 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 KRT40Q6A162 431 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.36
MDM2-215ENST00000428863 LMBR1Q8WVP7 490 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 SEPT1Q8WYJ6 367 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 JAKMIP1Q96N16 626 aaKnown RBP17.33■□□□□ 0.36
MDM2-215ENST00000428863 PCYT2Q99447 389 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 MXRA8Q9BRK3 442 aa17.33■□□□□ 0.36
MDM2-215ENST00000428863 SMCO2A6NFE2 343 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 KIF28PB7ZC32 967 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 HMGB1P09429 215 aaKnown RBP17.32■□□□□ 0.36
MDM2-215ENST00000428863 ARP10275 920 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 CLK2P49760 499 aaKnown RBP17.32■□□□□ 0.36
MDM2-215ENST00000428863 IKBKEQ14164 716 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 PLEKHG4Q58EX7 1191 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 CDHR1Q96JP9 859 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 KCNH7Q9NS40 1196 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 MTCH2Q9Y6C9 303 aa17.32■□□□□ 0.36
MDM2-215ENST00000428863 MAFGO15525 162 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 LPXNO60711 386 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 GJB5O95377 273 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 CTSHP09668 335 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 POU3F3P20264 500 aaPredicted RBP17.31■□□□□ 0.36
MDM2-215ENST00000428863 RCAN1P53805 252 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 ARHGAP4P98171 946 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 PPP1R18Q6NYC8 613 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 RUFY4Q6ZNE9 571 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 ARNTL2Q8WYA1 636 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 BRF1Q92994 677 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 ANO3Q9BYT9 981 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 ZNF215Q9UL58 517 aaPredicted RBP17.31■□□□□ 0.36
MDM2-215ENST00000428863 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
MDM2-215ENST00000428863 LOXHD1Q8IVV2 1947 aa17.31■□□□□ 0.36
MDM2-215ENST00000428863 COL4A4P53420 1690 aaPredicted RBP17.3■□□□□ 0.36
MDM2-215ENST00000428863 EMSYQ7Z589 1322 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 NRCAMQ92823 1304 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 GNAT1P11488 350 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 MARK3P27448 753 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 ADCY7P51828 1080 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 ITGB3BPQ13352 177 aaPredicted RBP17.3■□□□□ 0.36
MDM2-215ENST00000428863 PKN1Q16512 942 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 PFKFB3Q16875 520 aaPredicted RBP17.3■□□□□ 0.36
MDM2-215ENST00000428863 FAM26DQ5JW98 314 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 BLOC1S2Q6QNY1 142 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 ZBED2Q9BTP6 218 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
MDM2-215ENST00000428863 TCF20Q9UGU0 1960 aaKnown RBP17.29■□□□□ 0.36
MDM2-215ENST00000428863 TTC28Q96AY4 2481 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 MEIS1O00470 390 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 FOSP01100 380 aaPredicted RBP17.29■□□□□ 0.36
MDM2-215ENST00000428863 CHRNA1P02708 482 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 RPS6KB1P23443 525 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.36
MDM2-215ENST00000428863 NTRK3Q16288 839 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 MICALL1Q8N3F8 863 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 RAD9AQ99638 391 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 SLC9A2Q9UBY0 812 aa17.29■□□□□ 0.36
MDM2-215ENST00000428863 NID2Q14112 1375 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 EFCAB14O75071 495 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 PPFIA3O75145 1194 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 CAND2O75155 1236 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 SCG2P13521 617 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 SREBF1P36956 1147 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 FGD1P98174 961 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 GRB10Q13322 594 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 GRIK4Q16099 956 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 CEP55Q53EZ4 464 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 TJAP1Q5JTD0 557 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
MDM2-215ENST00000428863 CRYGNQ8WXF5 182 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 GLG1Q92896 1179 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 SMARCAD1Q9H4L7 1026 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 AGO4Q9HCK5 861 aaKnown RBP17.28■□□□□ 0.36
MDM2-215ENST00000428863 JPH1Q9HDC5 661 aaPredicted RBP17.28■□□□□ 0.36
MDM2-215ENST00000428863 ERAP1Q9NZ08 941 aa17.28■□□□□ 0.36
MDM2-215ENST00000428863 NFASCO94856 1347 aa17.27■□□□□ 0.36
MDM2-215ENST00000428863 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.27■□□□□ 0.36
MDM2-215ENST00000428863 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
MDM2-215ENST00000428863 LINC01553A4QN01 128 aa17.27■□□□□ 0.36
MDM2-215ENST00000428863 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
MDM2-215ENST00000428863 PRPF3O43395 683 aaKnown RBP17.27■□□□□ 0.36
MDM2-215ENST00000428863 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms