RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FAM26DQ5JW98 314 aa21.14■□□□□ 0.97
UPK3BP1-201ENST00000428678 RPAINQ86UA6 219 aa21.14■□□□□ 0.97
UPK3BP1-201ENST00000428678 SENP2Q9HC62 589 aa21.14■□□□□ 0.97
UPK3BP1-201ENST00000428678 TELO2Q9Y4R8 837 aa21.14■□□□□ 0.97
UPK3BP1-201ENST00000428678 ATG2AQ2TAZ0 1938 aa21.14■□□□□ 0.97
UPK3BP1-201ENST00000428678 GHRP10912 638 aa21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 ADAM17P78536 824 aa21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 ZP2Q05996 745 aa21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 COL19A1Q14993 1142 aa21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 WTAPQ15007 396 aa21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 ALYREFQ86V81 257 aaKnown RBP21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 PRKAG3Q9UGI9 489 aa21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
UPK3BP1-201ENST00000428678 NRCAMQ92823 1304 aa21.12■□□□□ 0.97
UPK3BP1-201ENST00000428678 CHRNA1P02708 482 aa21.12■□□□□ 0.97
UPK3BP1-201ENST00000428678 SART3Q15020 963 aaKnown RBP21.12■□□□□ 0.97
UPK3BP1-201ENST00000428678 RALYLQ86SE5 291 aaKnown RBP21.12■□□□□ 0.97
UPK3BP1-201ENST00000428678 C11orf84Q9BUA3 381 aaPredicted RBP21.12■□□□□ 0.97
UPK3BP1-201ENST00000428678 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
UPK3BP1-201ENST00000428678 ADGRA3Q8IWK6 1321 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 GRM6O15303 877 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 NCK2O43639 380 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 CSPG5O95196 566 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 RB1P06400 928 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 BMPR1AP36894 532 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 TROAPQ12815 778 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 CLUL1Q15846 466 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 RUFY4Q6ZNE9 571 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 CATIPQ7Z7H3 387 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 ADHFE1Q8IWW8 467 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 SMARCC2Q8TAQ2 1214 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 CUL5Q93034 780 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 RWDD3Q9Y3V2 267 aa21.11■□□□□ 0.97
UPK3BP1-201ENST00000428678 POTEB3A0JP26 581 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 C5orf67F2Z3F1 127 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 CYP21A2P08686 494 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 PCNX4Q63HM2 1172 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 TAF2Q6P1X5 1199 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 USP17L6PQ6QN14 398 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 POTEBQ6S5H4 581 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 NLRX1Q86UT6 975 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 SENP7Q9BQF6 1050 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 LMAN2LQ9H0V9 348 aa21.1■□□□□ 0.97
UPK3BP1-201ENST00000428678 C19orf67A6NJJ6 358 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 TCF7P36402 384 aaPredicted RBP21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 LTBRP36941 435 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 HYAL1Q12794 435 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 PPFIA1Q13136 1202 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 LPIN1Q14693 890 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 XRRA1Q6P2D8 792 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 RSPH3Q86UC2 560 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 GIMAP8Q8ND71 665 aaPredicted RBP21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 UPF3BQ9BZI7 483 aaKnown RBP21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 TTC3P53804 2025 aa21.09■□□□□ 0.97
UPK3BP1-201ENST00000428678 ZNF318Q5VUA4 2279 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 LINC00271P0C7V0 271 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 MARK3P27448 753 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 BTG3Q14201 252 aaPredicted RBP21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 CTC1Q2NKJ3 1217 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 RRP36Q96EU6 259 aaKnown RBP21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 IGFLR1Q9H665 355 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 EHMT1Q9H9B1 1298 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 TAF6LQ9Y6J9 622 aa21.08■□□□□ 0.97
UPK3BP1-201ENST00000428678 E7EWF7 191 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 ENPP3O14638 875 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 IRS1P35568 1242 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 PTH1RQ03431 593 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 DLX2Q07687 328 aaPredicted RBP21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 MGAT3Q09327 533 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 GRIK4Q16099 956 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 NCOA7Q8NI08 942 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 CLP1Q92989 425 aaKnown RBP21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 POP1Q99575 1024 aaKnown RBP21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 RC3H2Q9HBD1 1191 aaKnown RBP21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 SEC63Q9UGP8 760 aaKnown RBP21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 TUBE1Q9UJT0 475 aa21.07■□□□□ 0.96
UPK3BP1-201ENST00000428678 MEIS2O14770 477 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 SMAD2Q15796 467 aaKnown RBP21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 CTCFLQ8NI51 663 aaPredicted RBP21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 DNAJB3Q8WWF6 145 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 RUFY2Q8WXA3 655 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 GLG1Q92896 1179 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 SPZ1Q9BXG8 430 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 ERAP1Q9NZ08 941 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 CDY2AQ9Y6F7 541 aa21.06■□□□□ 0.96
UPK3BP1-201ENST00000428678 PIK3CDO00329 1044 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 MBTPS2O43462 519 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 ATP9AO75110 1047 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 KCNA2P16389 499 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 GTF2F1P35269 517 aaKnown RBP eCLIP21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 NHLH1Q02575 133 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 FBXO47Q5MNV8 452 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 TSHZ1Q6ZSZ6 1077 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 SEPT1Q8WYJ6 367 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 GPRASP2Q96D09 838 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 CDHR1Q96JP9 859 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 FBXL18Q96ME1 805 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 MYL10Q9BUA6 226 aa21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 ALG13Q9NP73 1137 aaKnown RBP21.05■□□□□ 0.96
UPK3BP1-201ENST00000428678 PKD2L1Q9P0L9 805 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms