RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 LENG9Q96B70 501 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 VWCEQ96DN2 955 aa18.99■□□□□ 0.63
VRK2-204ENST00000428021 SMIM10L2AP0DMW4 78 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 SMIM10L2BP0DMW5 78 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 TBCKQ8TEA7 893 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 UIMC1Q96RL1 719 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 PCYT2Q99447 389 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 SDF4Q9BRK5 362 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 RNPEPQ9H4A4 650 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 NOD1Q9Y239 953 aa18.98■□□□□ 0.63
VRK2-204ENST00000428021 IPO5O00410 1097 aaKnown RBP18.97■□□□□ 0.63
VRK2-204ENST00000428021 PITPNM1O00562 1244 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 LGR5O75473 907 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 ATG7O95352 703 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 CCNE2O96020 404 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 ACRP10323 421 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 ACTR2P61160 394 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 SETQ01105 290 aaPredicted RBP18.97■□□□□ 0.63
VRK2-204ENST00000428021 RABEP1Q15276 862 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 PRR16Q569H4 304 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 TMEM240Q5SV17 173 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 CCDC83Q8IWF9 413 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 OXER1Q8TDS5 423 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 WASF1Q92558 559 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 WNT8BQ93098 351 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 SCLYQ96I15 445 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 LRCH3Q96II8 777 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 TBC1D32Q96NH3 1257 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.97■□□□□ 0.63
VRK2-204ENST00000428021 IL23AQ9NPF7 189 aa18.97■□□□□ 0.63
VRK2-204ENST00000428021 SCN5AQ14524 2016 aa18.96■□□□□ 0.63
VRK2-204ENST00000428021 XBP1P17861 261 aa18.96■□□□□ 0.63
VRK2-204ENST00000428021 TRIM71Q2Q1W2 868 aaKnown RBP18.96■□□□□ 0.63
VRK2-204ENST00000428021 ZSCAN31Q96LW9 406 aaPredicted RBP18.96■□□□□ 0.63
VRK2-204ENST00000428021 ZNF577Q9BSK1 485 aa18.96■□□□□ 0.63
VRK2-204ENST00000428021 UPF2Q9HAU5 1272 aaKnown RBP18.96■□□□□ 0.63
VRK2-204ENST00000428021 ZNF215Q9UL58 517 aaPredicted RBP18.96■□□□□ 0.63
VRK2-204ENST00000428021 EMSYQ7Z589 1322 aa18.96■□□□□ 0.63
VRK2-204ENST00000428021 CYP3A7-CYP3A51PA0A087WV96 503 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 C17orf102A2RUQ5 167 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 DDX39AO00148 427 aaKnown RBP18.95■□□□□ 0.62
VRK2-204ENST00000428021 IQCF3P0C7M6 154 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 CYP3A7P24462 503 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 ADAM17P78536 824 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 RBL2Q08999 1139 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 PTK7Q13308 1070 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 BFSP2Q13515 415 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 NONOQ15233 471 aaKnown RBP eCLIP18.95■□□□□ 0.62
VRK2-204ENST00000428021 ZNF365Q70YC5 407 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 KRT25Q7Z3Z0 450 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 CAGE1Q8TC20 777 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 MBOAT7Q96N66 472 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 SMARCAD1Q9H4L7 1026 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 SH2B1Q9NRF2 756 aaPredicted RBP18.95■□□□□ 0.62
VRK2-204ENST00000428021 SETD4Q9NVD3 440 aa18.95■□□□□ 0.62
VRK2-204ENST00000428021 TANC1Q9C0D5 1861 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 IGKV6D-21A0A0A0MT36 114 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 MSH4O15457 936 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 TREHO43280 583 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 TDP2O95551 362 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 GPNMBQ14956 572 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 INF2Q27J81 1249 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 EARS2Q5JPH6 523 aaKnown RBP18.94■□□□□ 0.62
VRK2-204ENST00000428021 RASIP1Q5U651 963 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 ABHD15Q6UXT9 468 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 SERINC5Q86VE9 423 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 GLG1Q92896 1179 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 TNFRSF25Q93038 417 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 ATP6V0A1Q93050 837 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 RNPC3Q96LT9 517 aaKnown RBP18.94■□□□□ 0.62
VRK2-204ENST00000428021 LLPHQ9BRT6 129 aaKnown RBP18.94■□□□□ 0.62
VRK2-204ENST00000428021 BACH2Q9BYV9 841 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 TBC1D22BQ9NU19 505 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 ERAP1Q9NZ08 941 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 KAT6AQ92794 2004 aa18.94■□□□□ 0.62
VRK2-204ENST00000428021 CD2BP2O95400 341 aaKnown RBP18.93■□□□□ 0.62
VRK2-204ENST00000428021 CKBP12277 381 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 MARK3P27448 753 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 Q4G0T1 1027 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 TRAF7Q6Q0C0 670 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 MOXD1Q6UVY6 613 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 RETREG2Q8NC44 543 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 TET1Q8NFU7 2136 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 LMBR1Q8WVP7 490 aa18.93■□□□□ 0.62
VRK2-204ENST00000428021 CCDC194A0A1B0GVG4 234 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 MMP1P03956 469 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 FOSBP53539 338 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 NR5A1Q13285 461 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 KRT40Q6A162 431 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 PSRC1Q6PGN9 363 aaPredicted RBP18.92■□□□□ 0.62
VRK2-204ENST00000428021 PIK3AP1Q6ZUJ8 805 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 PLPPR4Q7Z2D5 763 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 RPUSD2Q8IZ73 545 aaKnown RBP18.92■□□□□ 0.62
VRK2-204ENST00000428021 CCDC155Q8N6L0 562 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 SLC5A5Q92911 643 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 NRCAMQ92823 1304 aa18.92■□□□□ 0.62
VRK2-204ENST00000428021 FAM205CA6NFA0 338 aa18.91■□□□□ 0.62
VRK2-204ENST00000428021 RBAK-RBAKDNI3L0D1 243 aa18.91■□□□□ 0.62
VRK2-204ENST00000428021 FGBP02675 491 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms