RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ZNF569Q5MCW4 686 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 OTOP1Q7RTM1 612 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 SAMD7Q7Z3H4 446 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 SFR1Q86XK3 245 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 LPAR1Q92633 364 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 HOOK2Q96ED9 719 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZFP91Q96JP5 570 aaPredicted RBP15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 CEP63Q96MT8 703 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 CARD6Q9BX69 1037 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 KCTD10Q9H3F6 313 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 MRFAP1Q9Y605 127 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 GJA3Q9Y6H8 435 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZNF536O15090 1300 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 ASTN2O75129 1339 aaPredicted RBP15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 GAS7O60861 476 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 ARHGAP25P42331 645 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 PPP2R5CQ13362 524 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 CTTNQ14247 550 aaKnown RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 ERCC6LQ2NKX8 1250 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 TBC1D10BQ4KMP7 808 aaPredicted RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 PRPF38AQ8NAV1 312 aaKnown RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 DYDC2Q96IM9 177 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZNF577Q9BSK1 485 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 TANGO6Q9C0B7 1094 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 TUFT1Q9NNX1 390 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 FAM207AQ9NSI2 230 aaPredicted RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 REXO2Q9Y3B8 237 aaKnown RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 CTNND1O60716 968 aaKnown RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 ABL1P00519 1130 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 HSD17B4P51659 736 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 CASP5P51878 434 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 PRELPP51888 382 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 SETQ01105 290 aaPredicted RBP15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 DGKZQ13574 1117 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 TPH2Q8IWU9 490 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 KIAA1683Q9H0B3 1180 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
APOBEC3D-202ENST00000427494 TBCAO75347 108 aaKnown RBP15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 GNA14O95837 355 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 ARP10275 920 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 CYLC1P35663 651 aaPredicted RBP15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 SLC35F6Q8N357 371 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 KCTD17Q8N5Z5 321 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 HSD17B14Q9BPX1 270 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 DEFB129Q9H1M3 183 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 NHEJ1Q9H9Q4 299 aaPredicted RBP15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 GINM1Q9NU53 330 aa15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 CNOT7Q9UIV1 285 aaKnown RBP15.48■□□□□ 0.07
APOBEC3D-202ENST00000427494 RSPH10B2B2RC85 870 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 NFIBO00712 420 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 EPHB6O15197 1021 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 TADA3O75528 432 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 RSPH10BP0C881 870 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 HERVK_113P62684 666 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 PPP2R3AQ06190 1150 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 DOCK1Q14185 1865 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 EDRF1Q3B7T1 1238 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 PIGOQ8TEQ8 1089 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 CCDC94Q9BW85 323 aaPredicted RBP15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 WDR11Q9BZH6 1224 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 LTBP3Q9NS15 1303 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 SLITRK3O94933 977 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 MYBP10242 640 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 ALAS1P13196 640 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 KRT83P78385 493 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 RINT1Q6NUQ1 792 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZC3H3Q8IXZ2 948 aaKnown RBP15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 CCDC170Q8IYT3 715 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 CCDC155Q8N6L0 562 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 UBXN4Q92575 508 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 MXRA8Q9BRK3 442 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 TEKT3Q9BXF9 490 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 UNC45AQ9H3U1 944 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 COL20A1Q9P218 1284 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 MYO1AQ9UBC5 1043 aa15.47■□□□□ 0.07
APOBEC3D-202ENST00000427494 RPTORQ8N122 1335 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 EFCAB8A8MWE9 144 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 FLOT1O75955 427 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 CDK17Q00537 523 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 ADAM9Q13443 819 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 MTMR2Q13614 643 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 KNOP1Q1ED39 458 aaKnown RBP15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 NBPF12Q5TAG4 269 aaPredicted RBP15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 EPM2AIP1Q7L775 607 aaPredicted RBP15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 KRT26Q7Z3Y9 468 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 KIAA1328Q86T90 577 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 MCF2L2Q86YR7 1114 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 NEK11Q8NG66 645 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 SMCR8Q8TEV9 937 aaPredicted RBP15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 CLEC4DQ8WXI8 215 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 RAVER2Q9HCJ3 691 aaKnown RBP15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 TRIM10Q9UDY6 481 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 GUCA1BQ9UMX6 200 aa15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.46■□□□□ 0.07
APOBEC3D-202ENST00000427494 FZD9O00144 591 aa15.45■□□□□ 0.06
APOBEC3D-202ENST00000427494 IPO5O00410 1097 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms