RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 CD4P01730 458 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 ACTR2P61160 394 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 UTP14CQ5TAP6 766 aaKnown RBP28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 SESTD1Q86VW0 696 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 TRIM50Q86XT4 487 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 TUT1Q9H6E5 874 aaKnown RBP28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 TCEAL9Q9UHQ7 104 aa28.49■■■□□ 2.15
HERPUD2-205ENST00000427455 EMSYQ7Z589 1322 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 B4GALT4O60513 344 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 CCNT1O60563 726 aaKnown RBP28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 C7orf31Q8N865 590 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 SLC5A5Q92911 643 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 UIMC1Q96RL1 719 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 TMEM39AQ9NV64 488 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 LTBP2Q14767 1821 aa28.48■■■□□ 2.15
HERPUD2-205ENST00000427455 KIAA0355O15063 1070 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 SLC37A4O43826 429 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 CCNE2O96020 404 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 GNL2Q13823 731 aaKnown RBP28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 SH3RF1Q7Z6J0 888 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 PPP1R13LQ8WUF5 828 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 RIT2Q99578 217 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 TBX21Q9UL17 535 aa28.47■■■□□ 2.15
HERPUD2-205ENST00000427455 KRT76Q01546 638 aa28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 LRCH2Q5VUJ6 765 aa28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 ZNF746Q6NUN9 644 aaPredicted RBP28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 ETNPPLQ8TBG4 499 aa28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 TRPV6Q9H1D0 765 aa28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 TRMT13Q9NUP7 481 aaKnown RBP28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 GTF2IRD1Q9UHL9 959 aa28.46■■■□□ 2.15
HERPUD2-205ENST00000427455 TRIM43BA6NCK2 446 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 GAS7O60861 476 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 LGR5O75473 907 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 ATG7O95352 703 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 SUPT20HL2P0C7V6 817 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 NOSTRINQ8IVI9 506 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 HSCBQ8IWL3 235 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 SMAP1Q8IYB5 467 aaPredicted RBP28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 TRIM43Q96BQ3 446 aaPredicted RBP28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 INTS4Q96HW7 963 aaKnown RBP28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 TEKT3Q9BXF9 490 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 SMARCAD1Q9H4L7 1026 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 AZI2Q9H6S1 392 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 HDAC6Q9UBN7 1215 aa28.45■■■□□ 2.14
HERPUD2-205ENST00000427455 GLG1Q92896 1179 aa28.44■■■□□ 2.14
HERPUD2-205ENST00000427455 KCNMB3Q9NPA1 279 aa28.44■■■□□ 2.14
HERPUD2-205ENST00000427455 ERAP1Q9NZ08 941 aa28.44■■■□□ 2.14
HERPUD2-205ENST00000427455 KIF28PB7ZC32 967 aa28.43■■■□□ 2.14
HERPUD2-205ENST00000427455 H3BQV1 296 aa28.43■■■□□ 2.14
HERPUD2-205ENST00000427455 U2AF2P26368 475 aaKnown RBP eCLIP28.43■■■□□ 2.14
HERPUD2-205ENST00000427455 MIS18BP1Q6P0N0 1132 aa28.43■■■□□ 2.14
HERPUD2-205ENST00000427455 ABHD15Q6UXT9 468 aa28.43■■■□□ 2.14
HERPUD2-205ENST00000427455 PCYT2Q99447 389 aa28.43■■■□□ 2.14
HERPUD2-205ENST00000427455 TBX3O15119 743 aa28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 PSMD10O75832 226 aa28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 RAG1P15918 1043 aa28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 GDF6Q6KF10 455 aaPredicted RBP28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 POTEDQ86YR6 584 aa28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 FAM20AQ96MK3 541 aa28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 NOD1Q9Y239 953 aa28.42■■■□□ 2.14
HERPUD2-205ENST00000427455 IGKV6D-21A0A0A0MT36 114 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 WDR64B1ANS9 1081 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 SMIM10L2AP0DMW4 78 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 SMIM10L2BP0DMW5 78 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 PTGISQ16647 500 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 LARP1BQ659C4 914 aaKnown RBP28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 PLPPR4Q7Z2D5 763 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 GJA10Q969M2 543 aa28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 LBHD1Q9BQE6 289 aaPredicted RBP28.41■■■□□ 2.14
HERPUD2-205ENST00000427455 BACH1O14867 736 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 MARK3P27448 753 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 HOXC8P31273 242 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 SFNP31947 248 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 MAGEA10P43363 369 aaPredicted RBP28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 FAM160B1Q5W0V3 765 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 CCDC60Q8IWA6 550 aaPredicted RBP28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 UNC45AQ9H3U1 944 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 PCDH10Q9P2E7 1040 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 PCDHA10Q9Y5I2 948 aa28.4■■■□□ 2.14
HERPUD2-205ENST00000427455 C17orf102A2RUQ5 167 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 WNT7AO00755 349 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 NEMFO60524 1076 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 TIMP1P01033 207 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 PSAPP07602 524 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 PDCP20941 246 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 ITGB8P26012 769 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 TRAPPC10P48553 1259 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 SLC26A2P50443 739 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 STAT5BP51692 787 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 JAK3P52333 1124 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 MCTP1Q6DN14 999 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 AFAP1L1Q8TED9 768 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 GDF15Q99988 308 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 HIPK3Q9H422 1215 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 RNPEPQ9H4A4 650 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 NOL7Q9UMY1 257 aaKnown RBP28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 SAMM50Q9Y512 469 aa28.39■■■□□ 2.14
HERPUD2-205ENST00000427455 CHMP2AO43633 222 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 MARCH6O60337 910 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 CYP2C9P11712 490 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms