RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 COPG2Q9UBF2 871 aa8.36□□□□□ -1.07
LINC00649-203ENST00000427447 MUSKO15146 869 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 STRN3Q13033 797 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 PPP2R5DQ14738 602 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 CCDC85BQ15834 202 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 ASIC2Q16515 512 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 SGO2Q562F6 1265 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 TMEM154Q6P9G4 183 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 KRT27Q7Z3Y8 459 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 CTNNAL1Q9UBT7 734 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 RUVBL2Q9Y230 463 aaKnown RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 SNAP23O00161 211 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 VWA5AO00534 786 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 HMGB2P26583 209 aaKnown RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 PURAQ00577 322 aaKnown RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 TMEM63BQ5T3F8 832 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 TAGAPQ8N103 731 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 MYCBPAPQ8TBZ2 947 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 MND1Q9BWT6 205 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 MYO5CQ9NQX4 1742 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 C2orf74A8MZ97 194 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 CCDC58Q4VC31 144 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 USP13Q92995 863 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 MTBPQ96DY7 904 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 SYNPO2Q9UMS6 1093 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 AKR1B15C9JRZ8 316 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 TTI1O43156 1089 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 EPN2O95208 641 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 ATF3P18847 181 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 UBE3BQ7Z3V4 1068 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 ADNPQ9H2P0 1102 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 PANK3Q9H999 370 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 LMBRD2Q68DH5 695 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 CPXCR1Q8N123 301 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 DIS3LQ8TF46 1054 aaKnown RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 PDE11AQ9HCR9 933 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 GUCA1BQ9UMX6 200 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 TRIM24O15164 1050 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 RGS10O43665 173 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 RAPGEF3O95398 923 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 OCM2P0CE71 109 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 OCMP0CE72 109 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 PSMA3P25788 255 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 GNAI1P63096 354 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 KLHL35Q6PF15 583 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 ABRAXAS1Q6UWZ7 409 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 MTMR9Q96QG7 549 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 SPATA2Q9UM82 520 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 CCDC141Q6ZP82 1450 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 RIMBP2O15034 1052 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 GYG2O15488 501 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 TMCC2O75069 709 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 ATF6P18850 670 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 FNTAP49354 379 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 KPNA1P52294 538 aaPredicted RBP8.35□□□□□ -1.07
LINC00649-203ENST00000427447 PLCB3Q01970 1234 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 ANO6Q4KMQ2 910 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 CYP26C1Q6V0L0 522 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 AP1M1Q9BXS5 423 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 HAUS2Q9NVX0 235 aa8.35□□□□□ -1.07
LINC00649-203ENST00000427447 MYOM3Q5VTT5 1437 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 FAM13AO94988 1023 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 SCG3Q8WXD2 468 aaKnown RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 MRPS27Q92552 414 aaKnown RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 PBXIP1Q96AQ6 731 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 CEP295NLQ96MC4 621 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 CHPF2Q9P2E5 772 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 GIT1Q9Y2X7 761 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 C11orf74Q86VG3 221 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 TBC1D2BQ9UPU7 963 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 BTN3A3O00478 584 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 SYNCRIPO60506 623 aaKnown RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 SLC9A1P19634 815 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 PTPN6P29350 595 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 YWHABP31946 246 aaKnown RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 GTF2H1P32780 548 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 SGSM1Q2NKQ1 1148 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 TMTC1Q8IUR5 882 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 PSMA8Q8TAA3 256 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 PHF21AQ96BD5 680 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 NVLO15381 856 aaKnown RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 PTGS1P23219 599 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 RSBN1Q5VWQ0 802 aaPredicted RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 ANKRD26P1Q6NSI1 321 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 CASC4Q6P4E1 433 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 GRAMD1AQ96CP6 724 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 VPS50Q96JG6 964 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 ATP6V1G3Q96LB4 118 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 NOX5Q96PH1 765 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 CCDC134Q9H6E4 229 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC00649-203ENST00000427447 BAG3O95817 575 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 ZNF445P59923 1031 aa8.34□□□□□ -1.07
LINC00649-203ENST00000427447 NSMCE1Q8WV22 266 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms