RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 RGL1Q9NZL6 768 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 ZBTB39O15060 712 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 PHACTR2O75167 634 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 SPATA31C1P0DKV0 1188 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 RASSF7Q02833 373 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 TATDN1Q6P1N9 297 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 CCDC84Q86UT8 332 aaPredicted RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 ACER1Q8TDN7 264 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 AMNQ9BXJ7 453 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 IDI2Q9BXS1 227 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 DHX36Q9H2U1 1008 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 YDJCA8MPS7 323 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 MYBL2P10244 700 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 ACTN1P12814 892 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 SLC12A3P55017 1021 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 KCNA1Q09470 495 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 TUBB2AQ13885 445 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 HYIQ5T013 277 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 NFRKBQ6P4R8 1299 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 PDXDC1Q6P996 788 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 CCDC65Q8IXS2 484 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 PURBQ96QR8 312 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 TUBB2BQ9BVA1 445 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
FIRRE-201ENST00000427391 H0YIN7 160 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 EML1O00423 815 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 PRPF6O94906 941 aaKnown RBP12.84□□□□□ -0.35
FIRRE-201ENST00000427391 HNRNPH3P31942 346 aaKnown RBP12.84□□□□□ -0.35
FIRRE-201ENST00000427391 MATR3P43243 847 aaKnown RBP eCLIP12.84□□□□□ -0.35
FIRRE-201ENST00000427391 PSMD2Q13200 908 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 CRYGNQ8WXF5 182 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 REEP2Q9BRK0 252 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 KCTD10Q9H3F6 313 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 MSH4O15457 936 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 CHMP2AO43633 222 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 MYBP10242 640 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 MAGEA1P43355 309 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 USP11P51784 963 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 USP14P54578 494 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 ADAM9Q13443 819 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 PIGOQ8TEQ8 1089 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 SH2D4AQ9H788 454 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
FIRRE-201ENST00000427391 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 KIF20AO95235 890 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 FGFR1OPO95684 399 aaKnown RBP12.83□□□□□ -0.36
FIRRE-201ENST00000427391 BMP3P12645 472 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 HOXD13P35453 343 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 CASP8Q14790 479 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 RUSC1Q9BVN2 902 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 BHMT2Q9H2M3 363 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 PLEKHA4Q9H4M7 779 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
FIRRE-201ENST00000427391 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 C21orf2O43822 256 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 CFBP00751 764 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 CYP3A7P24462 503 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 CDK17Q00537 523 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 GIT2Q14161 759 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.36
FIRRE-201ENST00000427391 PRR12Q9ULL5 1215 aa12.83□□□□□ -0.36
FIRRE-201ENST00000427391 RAD17O75943 681 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 NR2F2P24468 414 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 RAPGEF1Q13905 1077 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 CTTNQ14247 550 aaKnown RBP12.82□□□□□ -0.36
FIRRE-201ENST00000427391 HDXQ7Z353 690 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 TRIM59Q8IWR1 403 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 HNRNPLLQ8WVV9 542 aaKnown RBP12.82□□□□□ -0.36
FIRRE-201ENST00000427391 MBOAT7Q96N66 472 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.82□□□□□ -0.36
FIRRE-201ENST00000427391 POTEB2H3BUK9 544 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 CLIC2O15247 247 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 ERLIN1O75477 346 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 ZNF76P36508 570 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 NAP1L1P55209 391 aaKnown RBP12.82□□□□□ -0.36
FIRRE-201ENST00000427391 PTPROQ16827 1216 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 ASTE1Q2TB18 679 aaPredicted RBP12.82□□□□□ -0.36
FIRRE-201ENST00000427391 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
FIRRE-201ENST00000427391 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 VPS18Q9P253 973 aa12.82□□□□□ -0.36
FIRRE-201ENST00000427391 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms