RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 EPS15L1Q9UBC2 864 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 CYP2D7A0A087X1C5 515 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 GSTA4O15217 222 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 PRPSAP2O60256 369 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 TOM1L1O75674 476 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 TMC4Q7Z404 712 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 SIX6OS1Q8N1H7 587 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 LINC00301Q8NCQ3 95 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 PBKQ96KB5 322 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 ABCF3Q9NUQ8 709 aa19.4■□□□□ 0.7
ARHGEF28-203ENST00000426542 SERPING1P05155 500 aa19.39■□□□□ 0.7
ARHGEF28-203ENST00000426542 ABCD1P33897 745 aa19.39■□□□□ 0.7
ARHGEF28-203ENST00000426542 SLCO1A2P46721 670 aa19.39■□□□□ 0.7
ARHGEF28-203ENST00000426542 PPWD1Q96BP3 646 aaKnown RBP19.39■□□□□ 0.7
ARHGEF28-203ENST00000426542 PCDHA13Q9Y5I0 950 aa19.39■□□□□ 0.7
ARHGEF28-203ENST00000426542 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 EVI5O60447 810 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 MT-ND3P03897 115 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 CDC37Q16543 378 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 RNF123Q5XPI4 1314 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 USP17L3A6NCW0 530 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 USP17L4A6NCW7 530 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 USP17L1Q7RTZ2 530 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 ARMC9Q7Z3E5 817 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 DEPDC1BQ8WUY9 529 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 SPTLC3Q9NUV7 552 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 BBOX1O75936 387 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 KCNQ4P56696 695 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 ZNF449Q6P9G9 518 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 ADGRL2O95490 1459 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 GOLGA8IPA6NC78 632 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 GOLGA8JA6NMD2 632 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 PPFIA2O75334 1257 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 MYL1P05976 194 aa19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 HP1BP3Q5SSJ5 553 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF28-203ENST00000426542 HOXA13P31271 388 aaPredicted RBP19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 DHX9Q08211 1270 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 CTTNQ14247 550 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 WHAMMQ8TF30 809 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 OSBP2Q969R2 916 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 TTC1Q99614 292 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 DHX36Q9H2U1 1008 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 ZSWIM5Q9P217 1185 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 PCDHB6Q9Y5E3 794 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 PHLPP2Q6ZVD8 1323 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 LUC7L3O95232 432 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 MARK3P27448 753 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 CXorf38Q8TB03 319 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 PAGE5Q96GU1 130 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 SRGAP2CP0DJJ0 459 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 MXI1P50539 228 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 MKRN3Q13064 507 aaKnown RBP19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 GDAP1Q8TB36 358 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 PI4KBQ9UBF8 816 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 LRRD1A4D1F6 860 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 ANXA13P27216 316 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 SPOPLQ6IQ16 392 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■■■■ 76.9
ARHGEF28-203ENST00000426542 ORC6Q9Y5N6 252 aa19.38■□□□□ 0.69
ARHGEF28-203ENST00000426542 MECOMQ03112 1051 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 PSMD2Q13200 908 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 GAS2L3Q86XJ1 694 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 RPF1Q9H9Y2 349 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 FAF1Q9UNN5 650 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 SPDYE1Q8NFV5 336 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 TRPC5Q9UL62 973 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 SRPRBQ9Y5M8 271 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 C10orf76Q5T2E6 689 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 RASIP1Q5U651 963 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 CCHCR1Q8TD31 782 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 FRMD3A2A2Y4 597 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.691e-7■■□□□ 13.5
ARHGEF28-203ENST00000426542 KPNA2P52292 529 aaKnown RBP19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 SEPT2Q15019 361 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 OSBPL3Q9H4L5 887 aa19.37■□□□□ 0.69
ARHGEF28-203ENST00000426542 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 PDXDC2PQ6P474 469 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 HSPH1Q92598 858 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 FGD4Q96M96 766 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 NUDCD1Q96RS6 583 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 AP1M1Q9BXS5 423 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 PLS3P13797 630 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 ARHGEF6Q15052 776 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 FAM133BQ5BKY9 247 aaKnown RBP19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 RSBN1LQ6PCB5 846 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 PCGF5Q86SE9 256 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 PSPC1Q8WXF1 523 aaKnown RBP19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 ZWILCHQ9H900 591 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 IRAK4Q9NWZ3 460 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 PNMA6FA0A0J9YX94 578 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 WDR91A4D1P6 747 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 KRT10P13645 584 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 CCNE1P24864 410 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 CDR2Q01850 454 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 RNF139Q8WU17 664 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 MSTO1Q9BUK6 570 aa19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 OLA1Q9NTK5 396 aaKnown RBP19.36■□□□□ 0.69
ARHGEF28-203ENST00000426542 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms