RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ADGRA3Q8IWK6 1321 aa16.96■□□□□ 0.3
PDAP1-202ENST00000426447 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 ENPP3O14638 875 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 STAM2O75886 525 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 CHRNA1P02708 482 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 ICAM3P32942 547 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 GTF2F1P35269 517 aaKnown RBP eCLIP16.95■□□□□ 0.31e-7■■□□□ 11.4
PDAP1-202ENST00000426447 TRIM50Q86XT4 487 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 LMBR1Q8WVP7 490 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 PBXIP1Q96AQ6 731 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 PLVAPQ9BX97 442 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
PDAP1-202ENST00000426447 NRCAMQ92823 1304 aa16.95■□□□□ 0.3
PDAP1-202ENST00000426447 PALM3A6NDB9 673 aaPredicted RBP16.94■□□□□ 0.3
PDAP1-202ENST00000426447 LINC01565O15544 149 aa16.94■□□□□ 0.3
PDAP1-202ENST00000426447 FIBPO43427 364 aa16.94■□□□□ 0.3
PDAP1-202ENST00000426447 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
PDAP1-202ENST00000426447 ADAM15Q13444 863 aa16.94■□□□□ 0.3
PDAP1-202ENST00000426447 TAF2Q6P1X5 1199 aa16.94■□□□□ 0.3
PDAP1-202ENST00000426447 CLP1Q92989 425 aaKnown RBP16.94■□□□□ 0.3
PDAP1-202ENST00000426447 INPP4AQ96PE3 977 aaPredicted RBP16.94■□□□□ 0.3
PDAP1-202ENST00000426447 DSCC1Q9BVC3 393 aa16.94■□□□□ 0.3
PDAP1-202ENST00000426447 PLAGL2Q9UPG8 496 aa16.94■□□□□ 0.3
PDAP1-202ENST00000426447 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
PDAP1-202ENST00000426447 TBX10O75333 385 aa16.93■□□□□ 0.3
PDAP1-202ENST00000426447 MMP1P03956 469 aa16.93■□□□□ 0.3
PDAP1-202ENST00000426447 ADAM17P78536 824 aa16.93■□□□□ 0.3
PDAP1-202ENST00000426447 LPIN1Q14693 890 aa16.93■□□□□ 0.3
PDAP1-202ENST00000426447 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
PDAP1-202ENST00000426447 COL4A6Q14031 1691 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 PNMA6FA0A0J9YX94 578 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 TMEM221A6NGB7 291 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 M0R296 226 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 HIP1O00291 1037 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 LINC00271P0C7V0 271 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 PTPN5P54829 565 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
PDAP1-202ENST00000426447 PKN1Q16512 942 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 B4GALNT3Q6L9W6 998 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 RUFY4Q6ZNE9 571 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 TRIM67Q6ZTA4 783 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 BMP8AQ7Z5Y6 402 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 NLRX1Q86UT6 975 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 PIBF1Q8WXW3 757 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 ZNF689Q96CS4 500 aaPredicted RBP16.92■□□□□ 0.3
PDAP1-202ENST00000426447 PHOX2BQ99453 314 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 PRRX2Q99811 253 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 RIOX1Q9H6W3 641 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 EHMT1Q9H9B1 1298 aa16.92■□□□□ 0.3
PDAP1-202ENST00000426447 DGKIO75912 1065 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 TRDNQ13061 729 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 PPFIA1Q13136 1202 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 SEMA3FQ13275 785 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 SEC23AQ15436 765 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 NAALADL2Q58DX5 795 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 IER5LQ5T953 404 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
PDAP1-202ENST00000426447 SMARCC2Q8TAQ2 1214 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 DNAJB3Q8WWF6 145 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 CUL5Q93034 780 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 P2RX5Q93086 422 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 SNX27Q96L92 541 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 SENP7Q9BQF6 1050 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 TELO2Q9Y4R8 837 aa16.91■□□□□ 0.3
PDAP1-202ENST00000426447 ERICH2A1L162 156 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 TCF7P36402 384 aaPredicted RBP16.9■□□□□ 0.3
PDAP1-202ENST00000426447 CAMK1Q14012 370 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 GRM4Q14833 912 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 RBM23Q86U06 439 aaKnown RBP16.9■□□□□ 0.3
PDAP1-202ENST00000426447 PRSS33Q8NF86 280 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 GLG1Q92896 1179 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 RC3H2Q9HBD1 1191 aaKnown RBP16.9■□□□□ 0.3
PDAP1-202ENST00000426447 TUBE1Q9UJT0 475 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 CDY2AQ9Y6F7 541 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 MRPL42Q9Y6G3 142 aaKnown RBP16.9■□□□□ 0.3
PDAP1-202ENST00000426447 MYH6P13533 1939 aa16.9■□□□□ 0.3
PDAP1-202ENST00000426447 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
PDAP1-202ENST00000426447 EYA4O95677 639 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 ITGB1P05556 798 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 MARK3P27448 753 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 NRIP1P48552 1158 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 RRP1P56182 461 aaKnown RBP16.89■□□□□ 0.29
PDAP1-202ENST00000426447 ZXDAP98168 799 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 MGAT3Q09327 533 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 GRIK4Q16099 956 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 FBXO47Q5MNV8 452 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 PCNX4Q63HM2 1172 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 EFHBQ8N7U6 833 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 KLHL23Q8NBE8 558 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 SPPL3Q8TCT6 385 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 MICAL1Q8TDZ2 1067 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 MSLNLQ96KJ4 702 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 ERAP1Q9NZ08 941 aa16.89■□□□□ 0.29
PDAP1-202ENST00000426447 NLRC5Q86WI3 1866 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 CYTH3O43739 400 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 ST18O60284 1047 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 PPFIA3O75145 1194 aa16.88■□□□□ 0.29
PDAP1-202ENST00000426447 STAG3L1P0CL83 205 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms