RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CAMK4Q16566 473 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 HYIQ5T013 277 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 SASS6Q6UVJ0 657 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 SV2BQ7L1I2 683 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 ARMCX2Q7L311 632 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 MIER3Q7Z3K6 550 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 USP6NLQ92738 828 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 DHX58Q96C10 678 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 HSD17B14Q9BPX1 270 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 EIF2AK1Q9BQI3 630 aaKnown RBP11.58□□□□□ -0.56
MDC1-205ENST00000425072 SLC9A2Q9UBY0 812 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 SERTAD1Q9UHV2 236 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 DDX41Q9UJV9 622 aaKnown RBP11.58□□□□□ -0.56
MDC1-205ENST00000425072 VAV3Q9UKW4 847 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 SAMM50Q9Y512 469 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 PCDHA10Q9Y5I2 948 aa11.58□□□□□ -0.56
MDC1-205ENST00000425072 RBM47A0AV96 593 aaKnown RBP11.57□□□□□ -0.56
MDC1-205ENST00000425072 POTEMA6NI47 508 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 CCDC85CA6NKD9 419 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 PP2D1A8MPX8 630 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 SLITRK3O94933 977 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 PSAPP07602 524 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 TXNP10599 105 aaKnown RBP11.57□□□□□ -0.56
MDC1-205ENST00000425072 KCNA2P16389 499 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 CYP2B6P20813 491 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 SPIRE1Q08AE8 756 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 ZSCAN23Q3MJ62 389 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 OLFML2BQ68BL8 750 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 B3GNT9Q6UX72 402 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 CATSPER3Q86XQ3 398 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 TPH2Q8IWU9 490 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 GJA10Q969M2 543 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 PAGE5Q96GU1 130 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 FGD4Q96M96 766 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 UIMC1Q96RL1 719 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 MMTAG2Q9BU76 263 aaKnown RBP11.57□□□□□ -0.56
MDC1-205ENST00000425072 GTPBP4Q9BZE4 634 aaKnown RBP11.57□□□□□ -0.56
MDC1-205ENST00000425072 GZF1Q9H116 711 aaPredicted RBP11.57□□□□□ -0.56
MDC1-205ENST00000425072 ZSWIM4Q9H7M6 989 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 MLXIPQ9HAP2 919 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
MDC1-205ENST00000425072 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 PLXNB2O15031 1838 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 ASTN1O14525 1302 aa11.57□□□□□ -0.56
MDC1-205ENST00000425072 GPR25O00155 361 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 NKRFO15226 690 aaKnown RBP eCLIP11.56□□□□□ -0.56
MDC1-205ENST00000425072 QARSP47897 775 aaKnown RBP11.56□□□□□ -0.56
MDC1-205ENST00000425072 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
MDC1-205ENST00000425072 GRB10Q13322 594 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 ITGB3BPQ13352 177 aaPredicted RBP11.56□□□□□ -0.56
MDC1-205ENST00000425072 ACVR2BQ13705 512 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 LAMC2Q13753 1193 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 E2F4Q16254 413 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 MIS18BP1Q6P0N0 1132 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 OTUD6AQ7L8S5 288 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 EEPD1Q7L9B9 569 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 DHX37Q8IY37 1157 aaKnown RBP11.56□□□□□ -0.56
MDC1-205ENST00000425072 NPLOC4Q8TAT6 608 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 SEPT1Q8WYJ6 367 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 CCDC47Q96A33 483 aaKnown RBP11.56□□□□□ -0.56
MDC1-205ENST00000425072 ERO1AQ96HE7 468 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 UNC45AQ9H3U1 944 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 JPH1Q9HDC5 661 aaPredicted RBP11.56□□□□□ -0.56
MDC1-205ENST00000425072 PKD2L1Q9P0L9 805 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 NRBP1Q9UHY1 535 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
MDC1-205ENST00000425072 DDX39AO00148 427 aaKnown RBP11.55□□□□□ -0.56
MDC1-205ENST00000425072 EML1O00423 815 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 CHMP2AO43633 222 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 ACTN4O43707 911 aaKnown RBP11.55□□□□□ -0.56
MDC1-205ENST00000425072 FKTNO75072 461 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 ATG7O95352 703 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 CAVIN2O95810 425 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 SNAI1O95863 264 aaPredicted RBP11.55□□□□□ -0.56
MDC1-205ENST00000425072 SPATA31C1P0DKV0 1188 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 CCDC192P0DO97 292 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 PLCG1P19174 1290 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 LBX1P52954 281 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 PRMT2P55345 433 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 ZNF445P59923 1031 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 PSMC5P62195 406 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 SP2Q02086 613 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 POSTNQ15063 836 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 CELF3Q5SZQ8 465 aaKnown RBP11.55□□□□□ -0.56
MDC1-205ENST00000425072 MFSD14CQ5VZR4 134 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 TAPT1Q6NXT6 567 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 PDXDC2PQ6P474 469 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 CCDC62Q6P9F0 684 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 METTL7BQ6UX53 244 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 RBM43Q6ZSC3 357 aaKnown RBP11.55□□□□□ -0.56
MDC1-205ENST00000425072 CYFIP1Q7L576 1253 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 SH3RF1Q7Z6J0 888 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 TRIM47Q96LD4 638 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 PNMA5Q96PV4 448 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 GSDMAQ96QA5 445 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 PLIN2Q99541 437 aa11.55□□□□□ -0.56
MDC1-205ENST00000425072 APBA2Q99767 749 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms