RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 PWWP2AQ96N64 755 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 WRNIP1Q96S55 665 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 BCAS3Q9H6U6 928 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
HDAC9-209ENST00000425071 TCRBV5S4A2TA0A5A2 114 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-209ENST00000425071 C8BP07358 591 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 POU3F2P20265 443 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-209ENST00000425071 MC3RP41968 323 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 PAN2Q504Q3 1202 aaKnown RBP5.59□□□□□ -1.51
HDAC9-209ENST00000425071 SDE2Q6IQ49 451 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 OVCH1Q7RTY7 1134 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 KIF18BQ86Y91 864 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 LRRC56Q8IYG6 542 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-209ENST00000425071 KYQ8NBH2 561 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 SH3RF2Q8TEC5 729 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 ORAI3Q9BRQ5 295 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 SLKQ9H2G2 1235 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-209ENST00000425071 EPB41L4AQ9HCS5 686 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-209ENST00000425071 PLA2G2DQ9UNK4 145 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 CD2APQ9Y5K6 639 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 ATP23Q9Y6H3 246 aa5.59□□□□□ -1.51
HDAC9-209ENST00000425071 CADPSQ9ULU8 1353 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-209ENST00000425071 LRG1P02750 347 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 AMY2AP04746 511 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 AMY2BP19961 511 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 CFPP27918 469 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 LIMS1P48059 325 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 AFF3P51826 1226 aaKnown RBP5.58□□□□□ -1.52
HDAC9-209ENST00000425071 JAM2P57087 298 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 TMEM177Q53S58 311 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 TTLL7Q6ZT98 887 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 SAPCD2Q86UD0 394 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 NIM1KQ8IY84 436 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 AHI1Q8N157 1196 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 IGSF22Q8N9C0 903 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 FNIP1Q8TF40 1166 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 MFSD3Q96ES6 412 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 C11orf84Q9BUA3 381 aaPredicted RBP5.58□□□□□ -1.52
HDAC9-209ENST00000425071 CABP5Q9NP86 173 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 SAMD15Q9P1V8 674 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 COQ6Q9Y2Z9 468 aa5.58□□□□□ -1.52
HDAC9-209ENST00000425071 TNPO3Q9Y5L0 923 aaKnown RBP5.58□□□□□ -1.52
HDAC9-209ENST00000425071 WIZO95785 1651 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 SLC12A8A0AV02 714 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 MAN2B1O00754 1011 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 ENO2P09104 434 aaPredicted RBP5.57□□□□□ -1.52
HDAC9-209ENST00000425071 PTPN1P18031 435 aaKnown RBP5.57□□□□□ -1.52
HDAC9-209ENST00000425071 SDSP20132 328 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 STAT5AP42229 794 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 HERVK_113P62684 666 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 TKFCQ3LXA3 575 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 DALRD3Q5D0E6 543 aaKnown RBP5.57□□□□□ -1.52
HDAC9-209ENST00000425071 BTBD8Q5XKL5 378 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 OTOP1Q7RTM1 612 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 PTRH1Q86Y79 214 aaKnown RBP5.57□□□□□ -1.52
HDAC9-209ENST00000425071 PPM1KQ8N3J5 372 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 C2orf69Q8N8R5 385 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 LINC01356Q8N9X3 169 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 WNK4Q96J92 1243 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 GORASP1Q9BQQ3 440 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 IRF2BPLQ9H1B7 796 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 SMURF1Q9HCE7 757 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 TOP2AP11388 1531 aaKnown RBP5.57□□□□□ -1.52
HDAC9-209ENST00000425071 PDS5BQ9NTI5 1447 aa5.57□□□□□ -1.52
HDAC9-209ENST00000425071 HIP1RO75146 1068 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 CHGBP05060 677 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 KRT15P19012 456 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 MECP2P51608 486 aaKnown RBP5.56□□□□□ -1.52
HDAC9-209ENST00000425071 ITGA1P56199 1179 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 CFAP100Q494V2 611 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 VASNQ6EMK4 673 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 ABHD17CQ6PCB6 329 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 LRRTM3Q86VH5 581 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 C1QL4Q86Z23 238 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 FAM26EQ8N5C1 309 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 CHST14Q8NCH0 376 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 DDX1Q92499 740 aaKnown RBP5.56□□□□□ -1.52
HDAC9-209ENST00000425071 ZBTB8AQ96BR9 441 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 CLIC6Q96NY7 704 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 BOCQ9BWV1 1114 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 CD244Q9BZW8 370 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 DLL4Q9NR61 685 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 RIC8BQ9NVN3 520 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 NTMQ9P121 344 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 TELO2Q9Y4R8 837 aa5.56□□□□□ -1.52
HDAC9-209ENST00000425071 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
HDAC9-209ENST00000425071 JMJD7P0C870 316 aa5.55□□□□□ -1.52
HDAC9-209ENST00000425071 GRIN1Q05586 938 aa5.55□□□□□ -1.52
HDAC9-209ENST00000425071 FZD5Q13467 585 aa5.55□□□□□ -1.52
HDAC9-209ENST00000425071 TM4SF20Q53R12 229 aa5.55□□□□□ -1.52
HDAC9-209ENST00000425071 CDCA2Q69YH5 1023 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-209ENST00000425071 NOSTRINQ8IVI9 506 aa5.55□□□□□ -1.52
HDAC9-209ENST00000425071 CISD2Q8N5K1 135 aaKnown RBP5.55□□□□□ -1.52
HDAC9-209ENST00000425071 KCNH7Q9NS40 1196 aa5.55□□□□□ -1.52
HDAC9-209ENST00000425071 FAM90A27PA6NNH2 459 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms