RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 Q7L0L9 218 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 TMC7Q7Z402 723 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 SYT9Q86SS6 491 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 ANKRD35Q8N283 1001 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 BADQ92934 168 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 MKL1Q969V6 931 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 FERMT2Q96AC1 680 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 DYNLL2Q96FJ2 89 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 GLT1D1Q96MS3 346 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 TEX13BQ9BXU2 312 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 MTIF3Q9H2K0 278 aaKnown RBP6.33□□□□□ -1.4
VPS8-205ENST00000424721 SEMA6BQ9H3T3 888 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 ABHD16BQ9H3Z7 469 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 AVENQ9NQS1 362 aaPredicted RBP6.33□□□□□ -1.4
VPS8-205ENST00000424721 CLIP2Q9UDT6 1046 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 PNMA2Q9UL42 364 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 PPP1R9AQ9ULJ8 1098 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 ZSWIM8A7E2V4 1837 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 PHIPQ8WWQ0 1821 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 DOCK3Q8IZD9 2030 aa6.33□□□□□ -1.4
VPS8-205ENST00000424721 ELP1O95163 1332 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 SYNGAP1Q96PV0 1343 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 LOC285556D6RIA3 1793 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 ASB14A6NK59 587 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 B4DLN1 442 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 ATP2A1O14983 1001 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 RNF113AO15541 343 aaKnown RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 PRKAB2O43741 272 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 DUSP11O75319 330 aaKnown RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 CABYRO75952 493 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 TTLL1O95922 423 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 IGHA2P01877 340 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 RARAP10276 462 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 ARAFP10398 606 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 TDO2P48775 406 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 MRPL12P52815 198 aaKnown RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 FGD1P98174 961 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 FPGSQ05932 587 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 PPIGQ13427 754 aaKnown RBP eCLIP6.32□□□□□ -1.43e-8■□□□□ 10.6
VPS8-205ENST00000424721 ACVR2BQ13705 512 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 COL19A1Q14993 1142 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 SNX17Q15036 470 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 SHHQ15465 462 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 ZNF792Q3KQV3 632 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 TKFCQ3LXA3 575 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 TRIM60Q495X7 471 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 FAM83BQ5T0W9 1011 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 ZNF468Q5VIY5 522 aaPredicted RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 ANO1Q5XXA6 986 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 XKR5Q6UX68 686 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 MAMDC4Q6UXC1 1216 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 CCDC129Q6ZRS4 1044 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 C1orf229Q6ZS94 237 aaPredicted RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 FAM160B2Q86V87 743 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 SIAH1Q8IUQ4 282 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS8-205ENST00000424721 TMEM199Q8N511 208 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 GOLGA6L1Q8N7Z2 621 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 SLC44A5Q8NCS7 719 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 TRPV1Q8NER1 839 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 BHMTQ93088 406 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 STRBPQ96SI9 672 aaKnown RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 MPHOSPH6Q99547 160 aaKnown RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 GSX2Q9BZM3 304 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 AP5M1Q9H0R1 490 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 STARD7Q9NQZ5 370 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 KLF15Q9UIH9 416 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 GDF2Q9UK05 429 aaPredicted RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 RCAN3Q9UKA8 241 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.32□□□□□ -1.4
VPS8-205ENST00000424721 PTPRFP10586 1907 aa6.32□□□□□ -1.4
VPS8-205ENST00000424721 ANKRD33BA6NCL7 494 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 KIAA0355O15063 1070 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 GPR182O15218 404 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 TREHO43280 583 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 TIMP1P01033 207 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 PGK2P07205 417 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 TSPY3P0CV98 308 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 TSPY8P0CW00 308 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 CYP2D6P10635 497 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 BMP3P12645 472 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 NFKB1P19838 968 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 ADH6P28332 368 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 ACLYP53396 1101 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 IKQ13123 557 aaPredicted RBP6.31□□□□□ -1.4
VPS8-205ENST00000424721 KCNA10Q16322 511 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 BRDTQ58F21 947 aaPredicted RBP6.31□□□□□ -1.4
VPS8-205ENST00000424721 TTC39BQ5VTQ0 682 aaPredicted RBP6.31□□□□□ -1.4
VPS8-205ENST00000424721 IQSEC1Q6DN90 963 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 SNRNP48Q6IEG0 339 aaKnown RBP6.31□□□□□ -1.4
VPS8-205ENST00000424721 NOL8Q76FK4 1167 aaKnown RBP6.31□□□□□ -1.4
VPS8-205ENST00000424721 ANKRD33Q7Z3H0 272 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 TICAM2Q86XR7 235 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 RPUSD2Q8IZ73 545 aaKnown RBP6.31□□□□□ -1.4
VPS8-205ENST00000424721 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 KBTBD3Q8NAB2 608 aa6.31□□□□□ -1.4
VPS8-205ENST00000424721 APPBP2Q92624 585 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms