RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 CNTNAP5Q8WYK1 1306 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 TLL1O43897 1013 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 RCAN1P53805 252 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 UBE2SQ16763 222 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 WWC2Q6AWC2 1192 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 SPRED2Q7Z698 418 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 RPAINQ86UA6 219 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 TRIM50Q86XT4 487 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 RAD9AQ99638 391 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 CERS4Q9HA82 394 aa18.54■□□□□ 0.56
DDR1-234ENST00000424544 RBM28Q9NW13 759 aaKnown RBP18.54■□□□□ 0.56
DDR1-234ENST00000424544 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
DDR1-234ENST00000424544 GNAT1P11488 350 aa18.53■□□□□ 0.56
DDR1-234ENST00000424544 SYNE3Q6ZMZ3 975 aa18.53■□□□□ 0.56
DDR1-234ENST00000424544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.53■□□□□ 0.56
DDR1-234ENST00000424544 LMBR1Q8WVP7 490 aa18.53■□□□□ 0.56
DDR1-234ENST00000424544 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
DDR1-234ENST00000424544 ASB2Q96Q27 587 aa18.53■□□□□ 0.56
DDR1-234ENST00000424544 RIC8AQ9NPQ8 531 aa18.53■□□□□ 0.56
DDR1-234ENST00000424544 V9GY48 417 aaPredicted RBP18.53■□□□□ 0.56
DDR1-234ENST00000424544 NRCAMQ92823 1304 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 SPDYE3A6NKU9 549 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 ZBTB43O43298 467 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 CDC27P30260 824 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 TCF7P36402 384 aaPredicted RBP18.52■□□□□ 0.56
DDR1-234ENST00000424544 KRT32Q14532 448 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 UTP14CQ5TAP6 766 aaKnown RBP18.52■□□□□ 0.56
DDR1-234ENST00000424544 HEATR3Q7Z4Q2 680 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 FBXL16Q8N461 479 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 CYP2W1Q8TAV3 490 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 ARNTL2Q8WYA1 636 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 THEGQ9P2T0 379 aa18.52■□□□□ 0.56
DDR1-234ENST00000424544 ZNF215Q9UL58 517 aaPredicted RBP18.52■□□□□ 0.56
DDR1-234ENST00000424544 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
DDR1-234ENST00000424544 CLK2P49760 499 aaKnown RBP18.51■□□□□ 0.55
DDR1-234ENST00000424544 ERVK-21P61565 698 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 MRPS5P82675 430 aaKnown RBP18.51■□□□□ 0.55
DDR1-234ENST00000424544 HTRA4P83105 476 aaPredicted RBP18.51■□□□□ 0.55
DDR1-234ENST00000424544 GRB10Q13322 594 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 MTMR1Q13613 665 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 RTN1Q16799 776 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 KRT40Q6A162 431 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 PPP1R18Q6NYC8 613 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 PCYT2Q99447 389 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 MXRA8Q9BRK3 442 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 KCNH7Q9NS40 1196 aa18.51■□□□□ 0.55
DDR1-234ENST00000424544 MBLAC1A4D2B0 266 aaPredicted RBP18.5■□□□□ 0.55
DDR1-234ENST00000424544 hCG_1984214I3L0E3 225 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 STXBP3O00186 592 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 MEIS1O00470 390 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 FOSP01100 380 aaPredicted RBP18.5■□□□□ 0.55
DDR1-234ENST00000424544 CHRNA1P02708 482 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 HSPA4P34932 840 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 MARCH8Q5T0T0 291 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 ZNF713Q8N859 430 aaPredicted RBP18.5■□□□□ 0.55
DDR1-234ENST00000424544 SP7Q8TDD2 431 aaPredicted RBP18.5■□□□□ 0.55
DDR1-234ENST00000424544 CRYGNQ8WXF5 182 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 TOP1MTQ969P6 601 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 AGXT2Q9BYV1 514 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 EHMT1Q9H9B1 1298 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 BARHL2Q9NY43 387 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 LMCD1Q9NZU5 365 aa18.5■□□□□ 0.55
DDR1-234ENST00000424544 KAT6AQ92794 2004 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.49■□□□□ 0.55
DDR1-234ENST00000424544 LINC01553A4QN01 128 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 BMP1P13497 986 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 ADD1P35611 737 aaKnown RBP18.49■□□□□ 0.55
DDR1-234ENST00000424544 SP4Q02446 784 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 ZBED2Q9BTP6 218 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 SMARCAD1Q9H4L7 1026 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 SUGCTQ9HAC7 445 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 UPF2Q9HAU5 1272 aaKnown RBP18.49■□□□□ 0.55
DDR1-234ENST00000424544 ERAP1Q9NZ08 941 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 INSL6Q9Y581 213 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 NFASCO94856 1347 aa18.49■□□□□ 0.55
DDR1-234ENST00000424544 KLF18A0A0U1RQI7 1052 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 SMCO2A6NFE2 343 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 GTPBP6O43824 516 aaPredicted RBP18.48■□□□□ 0.55
DDR1-234ENST00000424544 ATG7O95352 703 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 ARP10275 920 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 ARHGAP4P98171 946 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 CEP55Q53EZ4 464 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 TAF2Q6P1X5 1199 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 SEPT8Q92599 483 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 MICAL3Q7RTP6 2002 aa18.48■□□□□ 0.55
DDR1-234ENST00000424544 AMHP03971 560 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 SREBF1P36956 1147 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 NAPAP54920 295 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 MGAT3Q09327 533 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 PFKFB3Q16875 520 aaPredicted RBP18.47■□□□□ 0.55
DDR1-234ENST00000424544 RUFY4Q6ZNE9 571 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
DDR1-234ENST00000424544 ANO3Q9BYT9 981 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 GLT8D2Q9H1C3 349 aa18.47■□□□□ 0.55
DDR1-234ENST00000424544 JPH1Q9HDC5 661 aaPredicted RBP18.47■□□□□ 0.55
DDR1-234ENST00000424544 BDP1A6H8Y1 2624 aa18.46■□□□□ 0.55
DDR1-234ENST00000424544 NID2Q14112 1375 aa18.46■□□□□ 0.55
DDR1-234ENST00000424544 IGKV6D-21A0A0A0MT36 114 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms