RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 CEP55Q53EZ4 464 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 TRAF7Q6Q0C0 670 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 CAGE1Q8TC20 777 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
NCDN-204ENST00000423723 DHX38Q92620 1227 aaKnown RBP13.21□□□□□ -0.29
NCDN-204ENST00000423723 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.29
NCDN-204ENST00000423723 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 KCNH7Q9NS40 1196 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 MTMR10Q9NXD2 777 aa13.21□□□□□ -0.29
NCDN-204ENST00000423723 GSTTP1A0A1W2PQM5 241 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 ATG7O95352 703 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 FGBP02675 491 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 CXCL10P02778 98 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
NCDN-204ENST00000423723 GNA11P29992 359 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 CIITAP33076 1130 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 CCL23P55773 120 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 PTK7Q13308 1070 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 BFSP2Q13515 415 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 CYP2W1Q8TAV3 490 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 GPT2Q8TD30 523 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 AFAP1L1Q8TED9 768 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 SEPT1Q8WYJ6 367 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 PHKBQ93100 1093 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 RNPC3Q96LT9 517 aaKnown RBP13.2□□□□□ -0.3
NCDN-204ENST00000423723 ANO3Q9BYT9 981 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 TELO2Q9Y4R8 837 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 ATP6V1DQ9Y5K8 247 aa13.2□□□□□ -0.3
NCDN-204ENST00000423723 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 M0R2N6 131 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
NCDN-204ENST00000423723 STX6O43752 255 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 LGR5O75473 907 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
NCDN-204ENST00000423723 ARHGAP4P98171 946 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 MTMR1Q13613 665 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 NPY5RQ15761 445 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 CAVIN1Q6NZI2 390 aaKnown RBP13.19□□□□□ -0.3
NCDN-204ENST00000423723 RPAINQ86UA6 219 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 SERINC5Q86VE9 423 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 C7orf31Q8N865 590 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 SYAP1Q96A49 352 aaPredicted RBP13.19□□□□□ -0.3
NCDN-204ENST00000423723 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
NCDN-204ENST00000423723 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
NCDN-204ENST00000423723 TET1Q8NFU7 2136 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 CHD9Q3L8U1 2897 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 NOP56O00567 594 aaKnown RBP13.18□□□□□ -0.3
NCDN-204ENST00000423723 PFKFB2O60825 505 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 DEXIO95424 95 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 LARGE1O95461 756 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 F13A1P00488 732 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 ARP10275 920 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 ACRP10323 421 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
NCDN-204ENST00000423723 SYT1P21579 422 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
NCDN-204ENST00000423723 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 BICD2Q8TD16 824 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 PPP1R13LQ8WUF5 828 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
NCDN-204ENST00000423723 SCLYQ96I15 445 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 AGO4Q9HCK5 861 aaKnown RBP13.18□□□□□ -0.3
NCDN-204ENST00000423723 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
NCDN-204ENST00000423723 A0A0C4DFX4 3053 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 CAND2O75155 1236 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 SMIM10L2AP0DMW4 78 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 SMIM10L2BP0DMW5 78 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 CKBP12277 381 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 SELPP16109 830 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 GJB2P29033 226 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
NCDN-204ENST00000423723 USP11P51784 963 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 AKAP17AQ02040 695 aaKnown RBP13.17□□□□□ -0.3
NCDN-204ENST00000423723 SCRN1Q12765 414 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
NCDN-204ENST00000423723 ME3Q16798 604 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 GALNT17Q6IS24 598 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 PLPPR4Q7Z2D5 763 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
NCDN-204ENST00000423723 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 RETREG2Q8NC44 543 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 WNT8BQ93098 351 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 PCYT2Q99447 389 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
NCDN-204ENST00000423723 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms