RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PARNO95453 639 aaKnown RBP17.38■□□□□ 0.37
USB1-202ENST00000423271 TCF7P36402 384 aaPredicted RBP17.38■□□□□ 0.37
USB1-202ENST00000423271 DEFB103AP81534 67 aa17.38■□□□□ 0.37
USB1-202ENST00000423271 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
USB1-202ENST00000423271 GIMAP8Q8ND71 665 aaPredicted RBP17.38■□□□□ 0.37
USB1-202ENST00000423271 CYP2W1Q8TAV3 490 aa17.38■□□□□ 0.37
USB1-202ENST00000423271 PHOSPHO2Q8TCD6 241 aa17.38■□□□□ 0.37
USB1-202ENST00000423271 ANO3Q9BYT9 981 aa17.38■□□□□ 0.37
USB1-202ENST00000423271 EHMT1Q9H9B1 1298 aa17.38■□□□□ 0.37
USB1-202ENST00000423271 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
USB1-202ENST00000423271 GSTTP1A0A1W2PQM5 241 aa17.37■□□□□ 0.37
USB1-202ENST00000423271 CTSHP09668 335 aa17.37■□□□□ 0.37
USB1-202ENST00000423271 KCNJ6P48051 423 aa17.37■□□□□ 0.37
USB1-202ENST00000423271 LMBR1Q8WVP7 490 aa17.37■□□□□ 0.37
USB1-202ENST00000423271 MXRA8Q9BRK3 442 aa17.37■□□□□ 0.37
USB1-202ENST00000423271 RSPH10B2B2RC85 870 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 ADAMTS3O15072 1205 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 PPFIA3O75145 1194 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 RSPH10BP0C881 870 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 MARK3P27448 753 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
USB1-202ENST00000423271 ADAM17P78536 824 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 ARHGAP4P98171 946 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 PFKFB3Q16875 520 aaPredicted RBP17.36■□□□□ 0.37
USB1-202ENST00000423271 SPRED2Q7Z698 418 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 PPM1EQ8WY54 764 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 AGXT2Q9BYV1 514 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 OSBPL7Q9BZF2 842 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 CERS4Q9HA82 394 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 KCNH7Q9NS40 1196 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 KAT6AQ92794 2004 aa17.36■□□□□ 0.37
USB1-202ENST00000423271 TRANK1O15050 2925 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 MICAL3Q7RTP6 2002 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 LCHNA4D1U4 455 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 LGR5O75473 907 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 FOSP01100 380 aaPredicted RBP17.35■□□□□ 0.37
USB1-202ENST00000423271 ARP10275 920 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 SCG2P13521 617 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 IGFBP4P22692 258 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 SREBF1P36956 1147 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 AP3B2Q13367 1082 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 PKN1Q16512 942 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 FBXL16Q8N461 479 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 PHKBQ93100 1093 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 JPH1Q9HDC5 661 aaPredicted RBP17.35■□□□□ 0.37
USB1-202ENST00000423271 PRDM6Q9NQX0 595 aa17.35■□□□□ 0.37
USB1-202ENST00000423271 ABHD14A-ACY1A0A1B0GW23 586 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 EPOPA6NHQ4 379 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 RFXAPO00287 272 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 MAFGO15525 162 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 TLL1O43897 1013 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 REV3LO60673 3130 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 GNAT1P11488 350 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 PSMA5P28066 241 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 TAP1Q03518 808 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 ITGB3BPQ13352 177 aaPredicted RBP17.34■□□□□ 0.37
USB1-202ENST00000423271 CEP55Q53EZ4 464 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 RUFY4Q6ZNE9 571 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 EMSYQ7Z589 1322 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 TEX2Q8IWB9 1127 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 DBF4BQ8NFT6 615 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 PCYT2Q99447 389 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 COL25A1Q9BXS0 654 aaPredicted RBP17.34■□□□□ 0.37
USB1-202ENST00000423271 SLC9A2Q9UBY0 812 aa17.34■□□□□ 0.37
USB1-202ENST00000423271 PRRC2BQ5JSZ5 2229 aaKnown RBP17.33■□□□□ 0.37
USB1-202ENST00000423271 NRCAMQ92823 1304 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 KIF28PB7ZC32 967 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.36
USB1-202ENST00000423271 PPFIA1Q13136 1202 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
USB1-202ENST00000423271 TOB2Q14106 344 aaPredicted RBP17.33■□□□□ 0.36
USB1-202ENST00000423271 IKBKEQ14164 716 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 CCDC85BQ15834 202 aaPredicted RBP17.33■□□□□ 0.36
USB1-202ENST00000423271 NTRK3Q16288 839 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 C8orf34Q49A92 452 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
USB1-202ENST00000423271 GLG1Q92896 1179 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 NCOA5Q9HCD5 579 aaKnown RBP17.33■□□□□ 0.36
USB1-202ENST00000423271 AGO4Q9HCK5 861 aaKnown RBP17.33■□□□□ 0.36
USB1-202ENST00000423271 ERAP1Q9NZ08 941 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 TTC28Q96AY4 2481 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 SIP14410 1827 aa17.33■□□□□ 0.36
USB1-202ENST00000423271 NFASCO94856 1347 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 MEIS1O00470 390 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 PRPF3O43395 683 aaKnown RBP17.32■□□□□ 0.36
USB1-202ENST00000423271 CAND2O75155 1236 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 GJB5O95377 273 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 PDIA3P30101 505 aaKnown RBP17.32■□□□□ 0.36
USB1-202ENST00000423271 CCT2P78371 535 aaKnown RBP17.32■□□□□ 0.36
USB1-202ENST00000423271 GRIK4Q16099 956 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 PLEKHG4Q58EX7 1191 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 FAM117BQ6P1L5 589 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 RUFY3Q7L099 469 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 ZBTB10Q96DT7 871 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 SDF4Q9BRK5 362 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms