RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TXKP42681 527 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-202ENST00000422991 ACTR2P61160 394 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 DNM1Q05193 864 aaKnown RBP19.17■□□□□ 0.66
COL7A1-202ENST00000422991 SPIRE1Q08AE8 756 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 PPP2R5CQ13362 524 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 BRDTQ58F21 947 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-202ENST00000422991 GNASQ5JWF2 1037 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 ATL3Q6DD88 541 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 CCSAPQ6IQ19 270 aaPredicted RBP19.17■□□□□ 0.66
COL7A1-202ENST00000422991 ARRDC4Q8NCT1 418 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 TCHHQ07283 1943 aa19.17■□□□□ 0.66
COL7A1-202ENST00000422991 GSTTP1A0A1W2PQM5 241 aa19.16■□□□□ 0.66
COL7A1-202ENST00000422991 DNM1LO00429 736 aa19.16■□□□□ 0.66
COL7A1-202ENST00000422991 CHMP2AO43633 222 aa19.16■□□□□ 0.66
COL7A1-202ENST00000422991 TFRCP02786 760 aaKnown RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 CAPN2P17655 700 aa19.16■□□□□ 0.66
COL7A1-202ENST00000422991 CEBPZQ03701 1054 aaKnown RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 DGKDQ16760 1214 aa19.16■□□□□ 0.66
COL7A1-202ENST00000422991 ARL6IP4Q66PJ3 421 aaKnown RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 SMAP1Q8IYB5 467 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 TSEN34Q9BSV6 310 aaKnown RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 TTC12Q9H892 705 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 PCDHA12Q9UN75 941 aa19.16■□□□□ 0.66
COL7A1-202ENST00000422991 MORC2Q9Y6X9 1032 aaPredicted RBP19.16■□□□□ 0.66
COL7A1-202ENST00000422991 WDR64B1ANS9 1081 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 ATG7O95352 703 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 MYCNP04198 464 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-202ENST00000422991 SFNP31947 248 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 TCF7P36402 384 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-202ENST00000422991 MNX1P50219 401 aaPredicted RBP19.15■□□□□ 0.66
COL7A1-202ENST00000422991 FXR2P51116 673 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL7A1-202ENST00000422991 JAK3P52333 1124 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 PCSK9Q8NBP7 692 aaKnown RBP19.15■□□□□ 0.66
COL7A1-202ENST00000422991 RDM1Q8NG50 284 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 SEPT1Q8WYJ6 367 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 TFIP11Q9UBB9 837 aaKnown RBP19.15■□□□□ 0.66
COL7A1-202ENST00000422991 SCN10AQ9Y5Y9 1956 aa19.15■□□□□ 0.66
COL7A1-202ENST00000422991 KBTBD13C9JR72 458 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 ZEB2O60315 1214 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 PPFIA4O75335 1185 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 YEATS4O95619 227 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 SUPT20HL2P0C7V6 817 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 PURAQ00577 322 aaKnown RBP19.14■□□□□ 0.65
COL7A1-202ENST00000422991 SLC39A14Q15043 492 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 KCNA10Q16322 511 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 IL17AQ16552 155 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 TMEM266Q2M3C6 531 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 ABHD15Q6UXT9 468 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 MIER3Q7Z3K6 550 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 ANKLE1Q8NAG6 615 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 LINC00301Q8NCQ3 95 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 CHAMP1Q96JM3 812 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 DISC1Q9NRI5 854 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 PHF24Q9UPV7 400 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 EMSYQ7Z589 1322 aa19.14■□□□□ 0.65
COL7A1-202ENST00000422991 MYH9P35579 1960 aaKnown RBP19.13■□□□□ 0.65
COL7A1-202ENST00000422991 IGKV6D-21A0A0A0MT36 114 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 MOXD2PA6NHM9 499 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 POTEMA6NI47 508 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 EML1O00423 815 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 KPNA6O60684 536 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 LGR5O75473 907 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 LGALS2P05162 132 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 ASGR1P07306 291 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 MYL3P08590 195 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 ZNF286BP0CG31 522 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 TECP42680 631 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 KRT85P78386 507 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 STK38Q15208 465 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 PRPF38BQ5VTL8 546 aaKnown RBP19.13■□□□□ 0.65
COL7A1-202ENST00000422991 NCAPH2Q6IBW4 605 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 MIS18BP1Q6P0N0 1132 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 DTHD1Q6ZMT9 781 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 PCYT2Q99447 389 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 CFAP45Q9UL16 551 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 PCDHA10Q9Y5I2 948 aa19.13■□□□□ 0.65
COL7A1-202ENST00000422991 F2P00734 622 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 PSAPP07602 524 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 ACLYP53396 1101 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 CXCL17Q6UXB2 119 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 TRIM50Q86XT4 487 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 CCDC60Q8IWA6 550 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-202ENST00000422991 IGSF22Q8N9C0 903 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 FERMT2Q96AC1 680 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 C16orf70Q9BSU1 422 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 FBXO2Q9UK22 296 aaPredicted RBP19.12■□□□□ 0.65
COL7A1-202ENST00000422991 SAMM50Q9Y512 469 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 DNAH12Q6ZR08 3092 aa19.12■□□□□ 0.65
COL7A1-202ENST00000422991 IGSF9BQ9UPX0 1349 aa19.11■□□□□ 0.65
COL7A1-202ENST00000422991 A0A1W2PQ45 241 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-202ENST00000422991 A0A1W2PQY0 241 aa19.11■□□□□ 0.65
COL7A1-202ENST00000422991 VWA3AA6NCI4 1184 aa19.11■□□□□ 0.65
COL7A1-202ENST00000422991 SPTLC2O15270 562 aa19.11■□□□□ 0.65
COL7A1-202ENST00000422991 NCLP19338 710 aaKnown RBP19.11■□□□□ 0.65
COL7A1-202ENST00000422991 MARCKSP29966 332 aaPredicted RBP19.11■□□□□ 0.65
COL7A1-202ENST00000422991 UTP14CQ5TAP6 766 aaKnown RBP19.11■□□□□ 0.65
COL7A1-202ENST00000422991 AFAP1L1Q8TED9 768 aa19.11■□□□□ 0.65
COL7A1-202ENST00000422991 DIS3LQ8TF46 1054 aaKnown RBP19.11■□□□□ 0.65
COL7A1-202ENST00000422991 KAT2BQ92831 832 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms