RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PPFIA4O75335 1185 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 CCNE2O96020 404 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 RESTQ13127 1097 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 PKP1Q13835 747 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 DGKDQ16760 1214 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 BRAPQ7Z569 592 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 NECAB2Q7Z6G3 386 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 SEPT1Q8WYJ6 367 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 HAS1Q92839 578 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 VTI1AQ96AJ9 217 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 C11orf49Q9H6J7 331 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 KCNMB3Q9NPA1 279 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 TBC1D22BQ9NU19 505 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 SLC9A2Q9UBY0 812 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 RBM19Q9Y4C8 960 aaKnown RBP10.49□□□□□ -0.73
PDGFC-202ENST00000422544 PCDHB6Q9Y5E3 794 aa10.49□□□□□ -0.73
PDGFC-202ENST00000422544 LRRC37A2A6NM11 1700 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 A0A1W2PQ45 241 aaPredicted RBP10.48□□□□□ -0.73
PDGFC-202ENST00000422544 GSTTP1A0A1W2PQM5 241 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 A0A1W2PQY0 241 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 MOXD2PA6NHM9 499 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 KPNA6O60684 536 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 GAS7O60861 476 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 PSMD10O75832 226 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 COL6A1P12109 1028 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 CHMP4BP1P59074 171 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 ACTR2P61160 394 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 PSMC6P62333 389 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 PURAQ00577 322 aaKnown RBP10.48□□□□□ -0.73
PDGFC-202ENST00000422544 CALCRLQ16602 461 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 RILPL1Q5EBL4 403 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
PDGFC-202ENST00000422544 LRCH2Q5VUJ6 765 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 FAM173BQ6P4H8 233 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 FAM20AQ96MK3 541 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 MTMR9Q96QG7 549 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 RIT2Q99578 217 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 TEKT3Q9BXF9 490 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 TMEM60Q9H2L4 133 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
PDGFC-202ENST00000422544 DAXXQ9UER7 740 aaPredicted RBP10.48□□□□□ -0.73
PDGFC-202ENST00000422544 MYH7BA7E2Y1 1941 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 TBX3O15119 743 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 CHMP2AO43633 222 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 BAG4O95429 457 aaKnown RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 LGALS2P05162 132 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 ZNF286BP0CG31 522 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 ZSCAN22P10073 491 aaPredicted RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 PDIA4P13667 645 aaKnown RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 TCF7P36402 384 aaPredicted RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 TXKP42681 527 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 ATN1P54259 1190 aaPredicted RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 SLFN12Q8IYM2 578 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 C4orf32Q8N8J7 132 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 PPP1R13LQ8WUF5 828 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 KAT2BQ92831 832 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 GLT1D1Q96MS3 346 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 MTG1Q9BT17 334 aaPredicted RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 UNC45AQ9H3U1 944 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 ZSCAN16Q9H4T2 348 aaPredicted RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 STARD7Q9NQZ5 370 aa10.47□□□□□ -0.73
PDGFC-202ENST00000422544 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
PDGFC-202ENST00000422544 CABYRO75952 493 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 ATG7O95352 703 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 KRT76Q01546 638 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 PTGDRQ13258 359 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 ORC2Q13416 577 aaPredicted RBP10.46□□□□□ -0.73
PDGFC-202ENST00000422544 ZNF746Q6NUN9 644 aaPredicted RBP10.46□□□□□ -0.73
PDGFC-202ENST00000422544 SWSAP1Q6NVH7 229 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 MIS18BP1Q6P0N0 1132 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 ABHD15Q6UXT9 468 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 SLC39A5Q6ZMH5 540 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 TRIM50Q86XT4 487 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 GLG1Q92896 1179 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 PCYT2Q99447 389 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 C16orf70Q9BSU1 422 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 DISC1Q9NRI5 854 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 TCEAL9Q9UHQ7 104 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 PCDHA12Q9UN75 941 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 ZDHHC9Q9Y397 364 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 SAMM50Q9Y512 469 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 GRIN2DO15399 1336 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 ELP1O95163 1332 aa10.46□□□□□ -0.73
PDGFC-202ENST00000422544 FRMPD3Q5JV73 1810 aa10.46□□□□□ -0.74
PDGFC-202ENST00000422544 KIAA1217Q5T5P2 1943 aa10.46□□□□□ -0.74
PDGFC-202ENST00000422544 WDR64B1ANS9 1081 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 H3BRB1 525 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 EML1O00423 815 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 BACH1O14867 736 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 LGR5O75473 907 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 BRD1O95696 1058 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 F13A1P00488 732 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 F2P00734 622 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 PSAPP07602 524 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 OR52Z1P0C646 297 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 SUPT20HL2P0C7V6 817 aa10.45□□□□□ -0.74
PDGFC-202ENST00000422544 MARK3P27448 753 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms