RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
NF1-203ENST00000422121 ITGB3BPQ13352 177 aaPredicted RBP11.32□□□□□ -0.6
NF1-203ENST00000422121 AP3B2Q13367 1082 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 CEP55Q53EZ4 464 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
NF1-203ENST00000422121 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
NF1-203ENST00000422121 MFSD5Q6N075 450 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 METTL7BQ6UX53 244 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 SESTD1Q86VW0 696 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 LBHD1Q9BQE6 289 aaPredicted RBP11.32□□□□□ -0.6
NF1-203ENST00000422121 SEZ6LQ9BYH1 1024 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 MLXIPQ9HAP2 919 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 KCNH7Q9NS40 1196 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 HDAC6Q9UBN7 1215 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
NF1-203ENST00000422121 SPTBN5Q9NRC6 3674 aaKnown RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 EYSQ5T1H1 3165 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 DHX15O43143 795 aaKnown RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 DEXIO95424 95 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 LGALS2P05162 132 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 CSF2RAP15509 400 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 PSEN2P49810 448 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 ZNF200P98182 395 aaPredicted RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 NEDD9Q14511 834 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 GPNMBQ14956 572 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 KIAA0753Q2KHM9 967 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 LRIT3Q3SXY7 679 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 DHX38Q92620 1227 aaKnown RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 WNT8BQ93098 351 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 GTF3C6Q969F1 213 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 LENG9Q96B70 501 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 PCYT2Q99447 389 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 GLT8D2Q9H1C3 349 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 SLKQ9H2G2 1235 aaPredicted RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
NF1-203ENST00000422121 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 SH3GLB2Q9NR46 395 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 PKD2L1Q9P0L9 805 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 GTF2IRD1Q9UHL9 959 aa11.31□□□□□ -0.6
NF1-203ENST00000422121 CPLX1O14810 134 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 MAFGO15525 162 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 GNA11P29992 359 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 HOXC8P31273 242 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 CHMP4BP1P59074 171 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 AKAP17AQ02040 695 aaKnown RBP11.3□□□□□ -0.6
NF1-203ENST00000422121 MTMR1Q13613 665 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 FAM47CQ5HY64 1035 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 TRIM50Q86XT4 487 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 NSUN7Q8NE18 718 aaKnown RBP11.3□□□□□ -0.6
NF1-203ENST00000422121 UIMC1Q96RL1 719 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 C22orf23Q9BZE7 217 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
NF1-203ENST00000422121 H3BRB1 525 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
NF1-203ENST00000422121 JAK2O60674 1132 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 EIF5BO60841 1220 aaKnown RBP11.29□□□□□ -0.6
NF1-203ENST00000422121 ATG7O95352 703 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 CCNE2O96020 404 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 ACRP10323 421 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 CIITAP33076 1130 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 CCL23P55773 120 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 ADAM17P78536 824 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 SP4Q02446 784 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 FPGSQ05932 587 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 TRIM71Q2Q1W2 868 aaKnown RBP11.29□□□□□ -0.6
NF1-203ENST00000422121 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
NF1-203ENST00000422121 TMEM240Q5SV17 173 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 NIPA1Q7RTP0 329 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 DAGLBQ8NCG7 672 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 CCDC12Q8WUD4 166 aaPredicted RBP11.29□□□□□ -0.6
NF1-203ENST00000422121 SCLYQ96I15 445 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
NF1-203ENST00000422121 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 RNPEPQ9H4A4 650 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 TUT1Q9H6E5 874 aaKnown RBP11.29□□□□□ -0.6
NF1-203ENST00000422121 PCDHA4Q9UN74 947 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
NF1-203ENST00000422121 TCF7P36402 384 aaPredicted RBP11.28□□□□□ -0.6
NF1-203ENST00000422121 NLRP5P59047 1200 aa11.28□□□□□ -0.6
NF1-203ENST00000422121 PTGISQ16647 500 aa11.28□□□□□ -0.6
NF1-203ENST00000422121 UTP14CQ5TAP6 766 aaKnown RBP11.28□□□□□ -0.6
NF1-203ENST00000422121 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
NF1-203ENST00000422121 BLIDQ8IZY5 108 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms