RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TBCKQ8TEA7 893 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 CCDC87Q9NVE4 849 aa13.32□□□□□ -0.28
CLCN4-203ENST00000421085 LRRIQ4A6NIV6 560 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 PFDN6O15212 129 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 TBC1D10BQ4KMP7 808 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 HNRNPDLO14979 420 aaKnown RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 SEMA3EO15041 775 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 TTI1O43156 1089 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 EPM2AIP1Q7L775 607 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 CEP19Q96LK0 163 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 HDAC6Q9UBN7 1215 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 MRPL11Q9Y3B7 192 aaKnown RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 KRT10P13645 584 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 RAD23BP54727 409 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 SPOPLQ6IQ16 392 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 DNAAF3Q8N9W5 541 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 KCTD6Q8NC69 237 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 FGD4Q96M96 766 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 SH3GL3Q99963 347 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 NOD1Q9Y239 953 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 PCDHA1Q9Y5I3 950 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 BPIFA3Q9BQP9 254 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 UPF3AQ9H1J1 476 aaKnown RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 SUFUQ9UMX1 484 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 ANO9A1A5B4 782 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 CYP2C19P33261 490 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 TMPRSS15P98073 1019 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 MDM2Q00987 491 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-203ENST00000421085 CCNYQ8ND76 341 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
CLCN4-203ENST00000421085 MEIS1O00470 390 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 ALAS1P13196 640 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 PDE6BP35913 854 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 MFSD14BQ5SR56 506 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 CCDC124Q96CT7 223 aaKnown RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 LRRC37BQ96QE4 947 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 CAPN11Q9UMQ6 739 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 TRIM66O15016 1216 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 RWDD2BP57060 319 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 GRM1Q13255 1194 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 RNF207Q6ZRF8 634 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 ATP6V1G3Q96LB4 118 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 SCHIP1Q9P0W5 487 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 OATP04181 439 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 S100BP04271 92 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 PMS2P54278 862 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 USP14P54578 494 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 DHX40Q8IX18 779 aaKnown RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 ETNK1Q9HBU6 452 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 IFRD2Q12894 506 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 BRDTQ58F21 947 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 FBXW10Q5XX13 1052 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 NFRKBQ6P4R8 1299 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 SRRM1Q8IYB3 904 aaKnown RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 ATP6V1E2Q96A05 226 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 GDAQ9Y2T3 454 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 PSMD2Q13200 908 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 DNAJC24Q6P3W2 148 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 ACCSQ96QU6 501 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 OSBPL9Q96SU4 736 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 SUGCTQ9HAC7 445 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 DIS3Q9Y2L1 958 aaKnown RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 MYOM2P54296 1465 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 CFAP73A6NFT4 308 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 KRT26Q7Z3Y9 468 aa13.3□□□□□ -0.28
CLCN4-203ENST00000421085 SKA2Q8WVK7 121 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-203ENST00000421085 NCK2O43639 380 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 IFNAR1P17181 557 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 GTF2IP78347 998 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 GUCY1A3Q02108 690 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 OCA2Q04671 838 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 MYLK4Q86YV6 388 aaPredicted RBP13.29□□□□□ -0.28
CLCN4-203ENST00000421085 ANGPTL3Q9Y5C1 460 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 SRGAP2BP0DMP2 458 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
CLCN4-203ENST00000421085 CDR2Q01850 454 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 LRRC63Q05C16 580 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 NUDCD3Q8IVD9 361 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 CHMP6Q96FZ7 201 aa13.29□□□□□ -0.28
CLCN4-203ENST00000421085 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms