RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CD99L2Q8TCZ2 262 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 DHX58Q96C10 678 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 PAGE5Q96GU1 130 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 GTPBP4Q9BZE4 634 aaKnown RBP15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 VTA1Q9NP79 307 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 GJD2Q9UKL4 321 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
SHMT1P1-201ENST00000419974 SYCE3A1L190 88 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 WDR64B1ANS9 1081 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 EML1O00423 815 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 SLITRK3O94933 977 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 ATG7O95352 703 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 GNRH1P01148 92 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 P4HBP07237 508 aaKnown RBP15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 CCDC192P0DO97 292 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 PLCG1P19174 1290 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 NEDD9Q14511 834 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 OLFML2BQ68BL8 750 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 PDILTQ8N807 584 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 GJA10Q969M2 543 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 MAML3Q96JK9 1138 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 GSDMAQ96QA5 445 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 MTRQ99707 1265 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 NUDT12Q9BQG2 462 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 EIF2AK1Q9BQI3 630 aaKnown RBP15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 UNC45AQ9H3U1 944 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 BLOC1S4Q9NUP1 217 aa15.98■□□□□ 0.15
SHMT1P1-201ENST00000419974 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 CAMK4Q16566 473 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 CT47A1Q5JQC4 288 aaPredicted RBP15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 WDR78Q5VTH9 848 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 ARMCX2Q7L311 632 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 DPP9Q86TI2 863 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 RAD54LQ92698 747 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 CDK5RAP3Q96JB5 506 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 C7orf25Q9BPX7 421 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 NRBP1Q9UHY1 535 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 HTTP42858 3142 aa15.97■□□□□ 0.15
SHMT1P1-201ENST00000419974 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 GTPBP6O43824 516 aaPredicted RBP15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 MED24O75448 989 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 SMC2O95347 1197 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 LACTBP83111 547 aaPredicted RBP15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 DPYDQ12882 1025 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 ECM1Q16610 540 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 METTL7BQ6UX53 244 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 LARP4BQ92615 738 aaKnown RBP15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 TINF2Q9BSI4 451 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 ABHD16BQ9H3Z7 469 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 JPH1Q9HDC5 661 aaPredicted RBP15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 KCND2Q9NZV8 630 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 TCEAL9Q9UHQ7 104 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 DNM3Q9UQ16 869 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 PCDHA10Q9Y5I2 948 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 PLXNB2O15031 1838 aa15.96■□□□□ 0.15
SHMT1P1-201ENST00000419974 RGS2P41220 211 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 FCGRTP55899 365 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 SP2Q02086 613 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 GSE1Q14687 1217 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 KCNB1Q14721 858 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 KIF22Q14807 665 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 TAPT1Q6NXT6 567 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 SASS6Q6UVJ0 657 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 SV2BQ7L1I2 683 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 C4orf19Q8IY42 314 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 SYT2Q8N9I0 419 aaPredicted RBP15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 RASSF8Q8NHQ8 419 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 NACC1Q96RE7 527 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 ZSWIM4Q9H7M6 989 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 SLC9A2Q9UBY0 812 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 PCDHA5Q9Y5H7 936 aa15.95■□□□□ 0.14
SHMT1P1-201ENST00000419974 PVALEFA0A1B0GWK0 134 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 FSD2A1L4K1 749 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 FARP2O94887 1054 aaPredicted RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 EYA4O95677 639 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 SNAI1O95863 264 aaPredicted RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 CCNE2O96020 404 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 QARSP47897 775 aaKnown RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 PRMT2P55345 433 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 CAP1Q01518 475 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 TTLL4Q14679 1199 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 TPRNQ4KMQ1 711 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 ABHD15Q6UXT9 468 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 MIER3Q7Z3K6 550 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 CKAP2LQ8IYA6 745 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 ARMC5Q96C12 935 aa15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 ZFP91Q96JP5 570 aaPredicted RBP15.94■□□□□ 0.14
SHMT1P1-201ENST00000419974 APBA2Q99767 749 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms