RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
PTPA-213ENST00000419582 BARX2Q9UMQ3 279 aaPredicted RBP17.64■□□□□ 0.41
PTPA-213ENST00000419582 DDX19BQ9UMR2 479 aa17.64■□□□□ 0.41
PTPA-213ENST00000419582 MRPL11Q9Y3B7 192 aaKnown RBP17.64■□□□□ 0.41
PTPA-213ENST00000419582 ACACBO00763 2458 aa17.64■□□□□ 0.41
PTPA-213ENST00000419582 GGPS1O95749 300 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 CHRNA1P02708 482 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 CTSHP09668 335 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 CLCN5P51795 746 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 SP2Q02086 613 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 UBE3AQ05086 875 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 FAM43BQ6ZT52 329 aaPredicted RBP17.63■□□□□ 0.41
PTPA-213ENST00000419582 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 ADSSL1Q8N142 457 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 SAMD3Q8N6K7 520 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 KLHL23Q8NBE8 558 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 POF1BQ8WVV4 589 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 S1PR5Q9H228 398 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 TLE6Q9H808 572 aa17.63■□□□□ 0.41
PTPA-213ENST00000419582 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
PTPA-213ENST00000419582 HSD17B4P51659 736 aa17.62■□□□□ 0.41
PTPA-213ENST00000419582 KCNC3Q14003 757 aa17.62■□□□□ 0.41
PTPA-213ENST00000419582 TMEM105Q8N8V8 129 aa17.62■□□□□ 0.41
PTPA-213ENST00000419582 PDCD2LQ9BRP1 358 aa17.62■□□□□ 0.41
PTPA-213ENST00000419582 MRPL42Q9Y6G3 142 aaKnown RBP17.62■□□□□ 0.41
PTPA-213ENST00000419582 CEP250Q9BV73 2442 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 CHD6Q8TD26 2715 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 LGALS2P05162 132 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 ASTLQ6HA08 431 aaPredicted RBP17.61■□□□□ 0.41
PTPA-213ENST00000419582 PDE12Q6L8Q7 609 aaKnown RBP17.61■□□□□ 0.41
PTPA-213ENST00000419582 FRMD5Q7Z6J6 570 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 RASGRP4Q8TDF6 673 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 SETD4Q9NVD3 440 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 SORCS3Q9UPU3 1222 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 SQORQ9Y6N5 450 aa17.61■□□□□ 0.41
PTPA-213ENST00000419582 MYH7BA7E2Y1 1941 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
PTPA-213ENST00000419582 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
PTPA-213ENST00000419582 UBA1P22314 1058 aaKnown RBP17.6■□□□□ 0.41
PTPA-213ENST00000419582 MGAT3Q09327 533 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 LPIN1Q14693 890 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 CDC37Q16543 378 aaPredicted RBP17.6■□□□□ 0.41
PTPA-213ENST00000419582 TAF2Q6P1X5 1199 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 RBM23Q86U06 439 aaKnown RBP17.6■□□□□ 0.41
PTPA-213ENST00000419582 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 SEMA4AQ9H3S1 761 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 NRCAMQ92823 1304 aa17.6■□□□□ 0.41
PTPA-213ENST00000419582 HOXB8P17481 243 aaPredicted RBP17.59■□□□□ 0.41
PTPA-213ENST00000419582 MTMR3Q13615 1198 aa17.59■□□□□ 0.41
PTPA-213ENST00000419582 DUSP6Q16828 381 aa17.59■□□□□ 0.41
PTPA-213ENST00000419582 NPAS4Q8IUM7 802 aa17.59■□□□□ 0.41
PTPA-213ENST00000419582 KREMEN2Q8NCW0 462 aa17.59■□□□□ 0.41
PTPA-213ENST00000419582 CCER2I3L3R5 266 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 RPLP2P05387 115 aaKnown RBP17.58■□□□□ 0.4
PTPA-213ENST00000419582 GHRP10912 638 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 NT5C2P49902 561 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 DGKHQ86XP1 1220 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 ADGRF4Q8IZF3 695 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 VN1R2Q8NFZ6 395 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 FTHL17Q9BXU8 183 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 NR2E1Q9Y466 385 aa17.58■□□□□ 0.4
PTPA-213ENST00000419582 ZFHX4Q86UP3 3567 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 MED19A0JLT2 244 aaPredicted RBP17.57■□□□□ 0.4
PTPA-213ENST00000419582 OPLAHO14841 1288 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 SRGAP2BP0DMP2 458 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 FBXO47Q5MNV8 452 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 METTL7BQ6UX53 244 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 TSHZ1Q6ZSZ6 1077 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 ZBTB33Q86T24 672 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 RTN4RL1Q86UN2 441 aaPredicted RBP17.57■□□□□ 0.4
PTPA-213ENST00000419582 LMBR1Q8WVP7 490 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 PCDHGC5Q9Y5F6 944 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 CHD8Q9HCK8 2581 aa17.57■□□□□ 0.4
PTPA-213ENST00000419582 CCDC171Q6TFL3 1326 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 CACNA1GO43497 2377 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 BRD1O95696 1058 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 CFBP00751 764 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 GOLGA8HP0CJ92 632 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 STAG3L1P0CL83 205 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 PGM5Q15124 567 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 QRICH1Q2TAL8 776 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 ANKRD54Q6NXT1 300 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 SYCE2Q6PIF2 218 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 DGLUCYQ7Z3D6 616 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 RSPH3Q86UC2 560 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 RMDN1Q96DB5 314 aa17.56■□□□□ 0.4
PTPA-213ENST00000419582 ZNF215Q9UL58 517 aaPredicted RBP17.56■□□□□ 0.4
PTPA-213ENST00000419582 ZMYM6O95789 1325 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 FSCN2O14926 492 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 STAM2O75886 525 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 FGAP02671 866 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 MYCLP12524 364 aaPredicted RBP17.55■□□□□ 0.4
PTPA-213ENST00000419582 ARHGAP4P98171 946 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 NEDD9Q14511 834 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 PUM1Q14671 1186 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPA-213ENST00000419582 ASPRV1Q53RT3 343 aa17.55■□□□□ 0.4
PTPA-213ENST00000419582 VPS53Q5VIR6 699 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms