RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 CALUO43852 315 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 LCA5LO95447 670 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ARHGAP4P98171 946 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ICA1Q05084 483 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KCNH2Q12809 1159 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 AP3B2Q13367 1082 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PJA2O43164 708 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PALMO75781 387 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FTCDO95954 541 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CYP11B2P19099 503 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CACNB3P54284 484 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RNASE9P60153 205 aaKnown RBP12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EHHADHQ08426 723 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DCAF4Q8WV16 495 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MTMR8Q96EF0 704 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SMARCAL1Q9NZC9 954 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MYBL2P10244 700 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CLK2P49760 499 aaKnown RBP12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NFIAQ12857 509 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CERS5Q8N5B7 392 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HDAC9Q9UKV0 1011 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CRKP46108 304 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ZNF622Q969S3 477 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FOSP01100 380 aaPredicted RBP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EDRF1Q3B7T1 1238 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GLE1Q53GS7 698 aaKnown RBP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SEPT12Q8IYM1 358 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EHD2Q9NZN4 543 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PITPNM2Q9BZ72 1349 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GCNT3O95395 438 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SYF2O95926 243 aaKnown RBP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TNNC1P63316 161 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DDR1Q08345 913 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TLR10Q9BXR5 811 aa12.85□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TMCO5BA8MYB1 307 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SLC26A4O43511 780 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PAK2Q13177 524 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RPS6KA1Q15418 735 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HYIQ5T013 277 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MS4A14Q96JA4 679 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RBM12Q9NTZ6 932 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 BZW2Q9Y6E2 419 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GOLGA8KD6RF30 607 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MED24O75448 989 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FLOT1O75955 427 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KNOP1Q1ED39 458 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KLHDC7AQ5VTJ3 777 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NPR1P16066 1061 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SNAP25P60880 206 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GUCY2DQ02846 1103 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NAB2Q15742 525 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CFAP58Q5T655 872 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HGSNATQ68CP4 663 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FGFBP2Q9BYJ0 223 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 METTL14Q9HCE5 456 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 F5H6K3 240 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 EDIL3O43854 480 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KLRC1P26715 233 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KLRC3Q07444 240 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 DNAJC21Q5F1R6 531 aaKnown RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 APOBEC3HQ6NTF7 200 aaKnown RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CATSPER3Q86XQ3 398 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 AENQ8WTP8 325 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms