RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ARSHQ5FYA8 562 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 PNMA8AQ86V59 439 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 CHST13Q8NET6 341 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 TSG101Q99816 390 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 TMX1Q9H3N1 280 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 UNC45AQ9H3U1 944 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 AGO4Q9HCK5 861 aaKnown RBP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 COL11A1P12107 1806 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 SPDYE5A6NIY4 337 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 CCND2P30279 289 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 PSMC6P62333 389 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 CYP4A11Q02928 519 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.582e-66■■■■■ 36.3
SSBP3-205ENST00000417664 BAATQ14032 418 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 TRIM14Q14142 442 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 HERC4Q5GLZ8 1057 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 IL31RAQ8NI17 732 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 NSUN6Q8TEA1 469 aaKnown RBP18.66■□□□□ 0.58
SSBP3-205ENST00000417664 RGL1Q9NZL6 768 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 PCDHA2Q9Y5H9 948 aa18.66■□□□□ 0.58
SSBP3-205ENST00000417664 PTPRFP10586 1907 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 OTOFQ9HC10 1997 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 A0A0G2JLL6 359 aaPredicted RBP18.65■□□□□ 0.58
SSBP3-205ENST00000417664 UNCXA6NJT0 531 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 TEX33O43247 280 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
SSBP3-205ENST00000417664 GIT2Q14161 759 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 LBX2Q6XYB7 198 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 PRRT2Q7Z6L0 340 aaPredicted RBP18.65■□□□□ 0.58
SSBP3-205ENST00000417664 VSIG10LQ86VR7 867 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 TPH2Q8IWU9 490 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 GPRASP2Q96D09 838 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 DYDC2Q96IM9 177 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 BHMT2Q9H2M3 363 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 SEMA6BQ9H3T3 888 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 FBXO40Q9UH90 709 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 UTRNP46939 3433 aa18.65■□□□□ 0.58
SSBP3-205ENST00000417664 A0A1W2PQC6 194 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 LGALS16A8MUM7 142 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 DHX15O43143 795 aaKnown RBP18.64■□□□□ 0.57
SSBP3-205ENST00000417664 CHMP2AO43633 222 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 COBLO75128 1261 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 P4HBP07237 508 aaKnown RBP18.64■□□□□ 0.57
SSBP3-205ENST00000417664 TPM1P09493 284 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 GAP43P17677 238 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 PPIL2Q13356 520 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 ARMC9Q7Z3E5 817 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 PPFIBP1Q86W92 1011 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 HPS3Q969F9 1004 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 TAF1DQ9H5J8 278 aaPredicted RBP18.64■□□□□ 0.57
SSBP3-205ENST00000417664 KCNH4Q9UQ05 1017 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 LOXHD1Q8IVV2 1947 aa18.64■□□□□ 0.57
SSBP3-205ENST00000417664 LOC285556D6RIA3 1793 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 NR3C2P08235 984 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 DNM2P50570 870 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CTTNQ14247 550 aaKnown RBP18.63■□□□□ 0.57
SSBP3-205ENST00000417664 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 MIER3Q7Z3K6 550 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 NLRX1Q86UT6 975 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 RDM1Q8NG50 284 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CDHR1Q96JP9 859 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 VPS16Q9H269 839 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 TAB2Q9NYJ8 693 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CYP39A1Q9NYL5 469 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 TCEAL9Q9UHQ7 104 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 AKR1B15C9JRZ8 316 aaPredicted RBP18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CCP110O43303 1012 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 STX10O60499 249 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 SFNP31947 248 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 RINT1Q6NUQ1 792 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CNGA4Q8IV77 575 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 DNERQ8NFT8 737 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CCDC51Q96ER9 411 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 CNOT6LQ96LI5 555 aaKnown RBP18.63■□□□□ 0.57
SSBP3-205ENST00000417664 PANX2Q96RD6 677 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 REEP2Q9BRK0 252 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 TUBGCP2Q9BSJ2 902 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 ZSWIM4Q9H7M6 989 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 ELP3Q9H9T3 547 aa18.63■□□□□ 0.57
SSBP3-205ENST00000417664 PFASO15067 1338 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 IRF6O14896 467 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 TBCAO75347 108 aaKnown RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 LYPLA2O95372 231 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 MYCLP12524 364 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 JAK3P52333 1124 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 FKBP3Q00688 224 aaKnown RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 KRT76Q01546 638 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 ZCWPW2Q504Y3 356 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 RIOX2Q8IUF8 465 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 TC2NQ8N9U0 490 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 INPP4AQ96PE3 977 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 IWS1Q96ST2 819 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 LXNQ9BS40 222 aa18.62■□□□□ 0.57
SSBP3-205ENST00000417664 NAA15Q9BXJ9 866 aaKnown RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 A1CFQ9NQ94 594 aaKnown RBP18.62■□□□□ 0.57
SSBP3-205ENST00000417664 OLFML3Q9NRN5 406 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms