RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 HAUS3Q68CZ6 603 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 ZNF746Q6NUN9 644 aaPredicted RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 MIS18BP1Q6P0N0 1132 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 METTL7BQ6UX53 244 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 RNF180Q86T96 592 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 TRPV1Q8NER1 839 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 ETNPPLQ8TBG4 499 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 GJA10Q969M2 543 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 LENG9Q96B70 501 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
TRIM48-201ENST00000417545 KATNBL1Q9H079 304 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 UNC93B1Q9H1C4 597 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 TMEM60Q9H2L4 133 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 AZI2Q9H6S1 392 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 KCNMB3Q9NPA1 279 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 LRWD1Q9UFC0 647 aa9.53□□□□□ -0.88
TRIM48-201ENST00000417545 GALR2O43603 387 aaPredicted RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 DKC1O60832 514 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 ATP9AO75110 1047 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 PPP6R2O75170 966 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 FARP2O94887 1054 aaPredicted RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 MYL3P08590 195 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 LONP1P36776 959 aaKnown RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 ITGB3BPQ13352 177 aaPredicted RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 UTP14CQ5TAP6 766 aaKnown RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 KRT79Q5XKE5 535 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 CCDC62Q6P9F0 684 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 CKAP2LQ8IYA6 745 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 LINC00301Q8NCQ3 95 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 ARRDC4Q8NCT1 418 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 LEO1Q8WVC0 666 aaPredicted RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 GLG1Q92896 1179 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 CALML4Q96GE6 196 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 UNC45AQ9H3U1 944 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 GDPD2Q9HCC8 539 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 FAM13BQ9NYF5 915 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 ZNF215Q9UL58 517 aaPredicted RBP9.52□□□□□ -0.89
TRIM48-201ENST00000417545 Q9Y3F1 56 aa9.52□□□□□ -0.89
TRIM48-201ENST00000417545 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 CUTAO60888 179 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 PGK1P00558 417 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 TFRCP02786 760 aaKnown RBP9.51□□□□□ -0.89
TRIM48-201ENST00000417545 TCF7P36402 384 aaPredicted RBP9.51□□□□□ -0.89
TRIM48-201ENST00000417545 CCT6AP40227 531 aaKnown RBP9.51□□□□□ -0.89
TRIM48-201ENST00000417545 UBA7P41226 1012 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 ACTR2P61160 394 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 ARHGAP1Q07960 439 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 MTFR1Q15390 333 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 FSCN1Q16658 493 aaKnown RBP9.51□□□□□ -0.89
TRIM48-201ENST00000417545 DGKDQ16760 1214 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 GNASQ5JWF2 1037 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 PCSK9Q8NBP7 692 aaKnown RBP9.51□□□□□ -0.89
TRIM48-201ENST00000417545 RDM1Q8NG50 284 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 PPTC7Q8NI37 304 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 NEK9Q8TD19 979 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 SNX29Q8TEQ0 813 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 AFG1LQ8WV93 481 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 SEPT1Q8WYJ6 367 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 HAS1Q92839 578 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 ATP6V0A1Q93050 837 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 AK8Q96MA6 479 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 DEFB118Q96PH6 123 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 DISC1Q9NRI5 854 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 PCDHA10Q9Y5I2 948 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 MYH9P35579 1960 aaKnown RBP9.51□□□□□ -0.89
TRIM48-201ENST00000417545 KDM3AQ9Y4C1 1321 aa9.51□□□□□ -0.89
TRIM48-201ENST00000417545 EDIL3O43854 480 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 KPNA6O60684 536 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 PSMD10O75832 226 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 MMP3P08254 477 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 SUPT20HL2P0C7V6 817 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 GJA9P57773 515 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 BEX3Q00994 111 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 SP2Q02086 613 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 PPP2R5CQ13362 524 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 PTPAQ15257 358 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 EPHA7Q15375 998 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 TRMT1LQ7Z2T5 733 aaKnown RBP9.5□□□□□ -0.89
TRIM48-201ENST00000417545 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
TRIM48-201ENST00000417545 ARMC5Q96C12 935 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 ZNF333Q96JL9 665 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 KATNAL1Q9BW62 490 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 CSRNP2Q9H175 543 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 ZNF302Q9NR11 478 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 CCDC39Q9UFE4 941 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 GNEQ9Y223 722 aaKnown RBP9.5□□□□□ -0.89
TRIM48-201ENST00000417545 SRPRBQ9Y5M8 271 aaKnown RBP9.5□□□□□ -0.89
TRIM48-201ENST00000417545 PCNTO95613 3336 aa9.5□□□□□ -0.89
TRIM48-201ENST00000417545 LOXHD1Q8IVV2 1947 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 ADCY6O43306 1168 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 CYP4A11Q02928 519 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 PDIA5Q14554 519 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 HSDL1Q3SXM5 330 aa9.49□□□□□ -0.89
TRIM48-201ENST00000417545 TMEM63BQ5T3F8 832 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms