RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 SP4Q02446 784 aa21.08■□□□□ 0.97
VPS16-204ENST00000417508 TJAP1Q5JTD0 557 aa21.08■□□□□ 0.97
VPS16-204ENST00000417508 TNPO1Q92973 898 aaKnown RBP21.08■□□□□ 0.97
VPS16-204ENST00000417508 MXRA8Q9BRK3 442 aa21.08■□□□□ 0.97
VPS16-204ENST00000417508 SMARCAD1Q9H4L7 1026 aa21.08■□□□□ 0.97
VPS16-204ENST00000417508 FAM217BQ9NTX9 383 aaPredicted RBP21.08■□□□□ 0.97
VPS16-204ENST00000417508 ERAP1Q9NZ08 941 aa21.08■□□□□ 0.97
VPS16-204ENST00000417508 PRRC2BQ5JSZ5 2229 aaKnown RBP21.07■□□□□ 0.96
VPS16-204ENST00000417508 GSTTP1A0A1W2PQM5 241 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 SMCO2A6NFE2 343 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 REC8O95072 547 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 AP3B2Q13367 1082 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 PLEKHG4Q58EX7 1191 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 FAM26DQ5JW98 314 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 MCTP2Q6DN12 878 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 BLOC1S2Q6QNY1 142 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 RPAINQ86UA6 219 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 TRIM50Q86XT4 487 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 DBF4BQ8NFT6 615 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 SEPT8Q92599 483 aa21.07■□□□□ 0.96
VPS16-204ENST00000417508 STXBP3O00186 592 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
VPS16-204ENST00000417508 PSMA5P28066 241 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 CDC27P30260 824 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 METAP2P50579 478 aaKnown RBP eCLIP21.06■□□□□ 0.96
VPS16-204ENST00000417508 DEFB103AP81534 67 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 ARHGAP4P98171 946 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 CCDC85BQ15834 202 aaPredicted RBP21.06■□□□□ 0.96
VPS16-204ENST00000417508 TAF2Q6P1X5 1199 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 LMBR1Q8WVP7 490 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 KCNH7Q9NS40 1196 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 THEGQ9P2T0 379 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 PTPRSQ13332 1948 aa21.06■□□□□ 0.96
VPS16-204ENST00000417508 NFASCO94856 1347 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 AMHP03971 560 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 RPLP2P05387 115 aaKnown RBP21.05■□□□□ 0.96
VPS16-204ENST00000417508 PFKFB3Q16875 520 aaPredicted RBP21.05■□□□□ 0.96
VPS16-204ENST00000417508 TCTN1Q2MV58 587 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 CEP55Q53EZ4 464 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 TYW1BQ6NUM6 668 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 Q6ZUG5 572 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 RSPH3Q86UC2 560 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 ARNTL2Q8WYA1 636 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 GLG1Q92896 1179 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 JAKMIP1Q96N16 626 aaKnown RBP21.05■□□□□ 0.96
VPS16-204ENST00000417508 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 JPH1Q9HDC5 661 aaPredicted RBP21.05■□□□□ 0.96
VPS16-204ENST00000417508 SLC9A2Q9UBY0 812 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 NAP1L2Q9ULW6 460 aaPredicted RBP21.05■□□□□ 0.96
VPS16-204ENST00000417508 TELO2Q9Y4R8 837 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 INSL6Q9Y581 213 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 SNX14Q9Y5W7 946 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 MTCH2Q9Y6C9 303 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 PRUNE2Q8WUY3 3088 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 NCOR1O75376 2440 aa21.05■□□□□ 0.96
VPS16-204ENST00000417508 RRN3P2A6NIE6 340 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 MEIS1O00470 390 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 ADD1P35611 737 aaKnown RBP21.04■□□□□ 0.96
VPS16-204ENST00000417508 CLK2P49760 499 aaKnown RBP21.04■□□□□ 0.96
VPS16-204ENST00000417508 MRPS5P82675 430 aaKnown RBP21.04■□□□□ 0.96
VPS16-204ENST00000417508 MKRN4PQ13434 485 aaPredicted RBP21.04■□□□□ 0.96
VPS16-204ENST00000417508 NIPA1Q7RTP0 329 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 CCDC12Q8WUD4 166 aaPredicted RBP21.04■□□□□ 0.96
VPS16-204ENST00000417508 APBB2Q92870 758 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 ANO3Q9BYT9 981 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 AZI2Q9H6S1 392 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 CERS4Q9HA82 394 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 LMCD1Q9NZU5 365 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 MICAL3Q7RTP6 2002 aa21.04■□□□□ 0.96
VPS16-204ENST00000417508 ESYT2A0FGR8 921 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 MBLAC1A4D2B0 266 aaPredicted RBP21.03■□□□□ 0.96
VPS16-204ENST00000417508 SCG2P13521 617 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 SREBF1P36956 1147 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 APOBRQ0VD83 1088 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 PPFIA1Q13136 1202 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 BRF1Q92994 677 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 ASB2Q96Q27 587 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 AGXT2Q9BYV1 514 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 PRDM6Q9NQX0 595 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 CHD7Q9P2D1 2997 aa21.03■□□□□ 0.96
VPS16-204ENST00000417508 RFXAPO00287 272 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 PRPF3O43395 683 aaKnown RBP21.02■□□□□ 0.96
VPS16-204ENST00000417508 ARHGEF15O94989 841 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 RPS6KB1P23443 525 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 ZNF76P36508 570 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 ERVK-21P61565 698 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 GRIK4Q16099 956 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.02■□□□□ 0.96
VPS16-204ENST00000417508 PLPPR4Q7Z2D5 763 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 CYP2W1Q8TAV3 490 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 TGS1Q96RS0 853 aaKnown RBP21.02■□□□□ 0.96
VPS16-204ENST00000417508 ZMYND12Q9H0C1 365 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 C6orf50Q9HD87 102 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 PKD2L1Q9P0L9 805 aa21.02■□□□□ 0.96
VPS16-204ENST00000417508 NID2Q14112 1375 aa21.01■□□□□ 0.95
VPS16-204ENST00000417508 EYSQ5T1H1 3165 aa21.01■□□□□ 0.95
VPS16-204ENST00000417508 EPOPA6NHQ4 379 aa21.01■□□□□ 0.95
VPS16-204ENST00000417508 CYP3A4P08684 503 aa21.01■□□□□ 0.95
VPS16-204ENST00000417508 CTSHP09668 335 aa21.01■□□□□ 0.95
VPS16-204ENST00000417508 CPA1P15085 419 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms