RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 C8orf74Q6P047 294 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 ZNF572Q7Z3I7 529 aaPredicted RBP15.96■□□□□ 0.15
HDAC9-208ENST00000417496 TRIM59Q8IWR1 403 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 IFT81Q8WYA0 676 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 LRRC27Q9C0I9 530 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 KCTD10Q9H3F6 313 aa15.96■□□□□ 0.15
HDAC9-208ENST00000417496 RPS6KA5O75582 802 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 SERPING1P05155 500 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 FAM153BP0C7A2 387 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 CARSP49589 748 aaKnown RBP15.96■□□□□ 0.14
HDAC9-208ENST00000417496 DDR1Q08345 913 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 QRICH1Q2TAL8 776 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 FAM153CQ494X1 144 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 KCNQ5Q9NR82 932 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 FAM153AQ9UHL3 310 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 USP21Q9UK80 565 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.14
HDAC9-208ENST00000417496 CDC42EP5Q6NZY7 148 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 SLC30A10Q6XR72 485 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 CCDC65Q8IXS2 484 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 FAM76AQ8TAV0 307 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 ARL8AQ96BM9 186 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 DNAJC5Q9H3Z4 198 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 ATF5Q9Y2D1 282 aaPredicted RBP15.95■□□□□ 0.14
HDAC9-208ENST00000417496 PLIN4Q96Q06 1357 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 SLC9A1P19634 815 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 KLHL30Q0D2K2 578 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 KCNH2Q12809 1159 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 PABPC4Q13310 644 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDAC9-208ENST00000417496 PRR16Q569H4 304 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 PROCA1Q8NCQ7 364 aaPredicted RBP15.95■□□□□ 0.14
HDAC9-208ENST00000417496 NFU1Q9UMS0 254 aa15.95■□□□□ 0.14
HDAC9-208ENST00000417496 VGLL3A8MV65 326 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 RBAK-RBAKDNI3L0D1 243 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 KRT14P02533 472 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 NR2F2P24468 414 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 EPS15P42566 896 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 GUCY2DQ02846 1103 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 ITIH3Q06033 890 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 CFAP221Q4G0U5 840 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 KCTD16Q68DU8 428 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 CATSPER3Q86XQ3 398 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 NT5C3AQ9H0P0 336 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 DNAJC18Q9H819 358 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 EPB41L5Q9HCM4 733 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 NAB2Q15742 525 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 SLC18A3Q16572 532 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
HDAC9-208ENST00000417496 RNF10Q8N5U6 811 aaKnown RBP15.94■□□□□ 0.14
HDAC9-208ENST00000417496 IKZF4Q9H2S9 585 aa15.94■□□□□ 0.14
HDAC9-208ENST00000417496 GUCY2FP51841 1108 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 CYP4A11Q02928 519 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 PPARDQ03181 441 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 PTK2Q05397 1052 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 USH1GQ495M9 461 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 KRT12Q99456 494 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 ANO3Q9BYT9 981 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 RASSF4Q9H2L5 321 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 KCNMB3Q9NPA1 279 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 EEF2P13639 858 aaKnown RBP15.93■□□□□ 0.14
HDAC9-208ENST00000417496 IRAK1P51617 712 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 SLC12A3P55017 1021 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 KCNA1Q09470 495 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 HYIQ5T013 277 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 APOBEC3HQ6NTF7 200 aaKnown RBP15.93■□□□□ 0.14
HDAC9-208ENST00000417496 PPP1R18Q6NYC8 613 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 CYP2W1Q8TAV3 490 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 CEP63Q96MT8 703 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 EDEM3Q9BZQ6 932 aa15.93■□□□□ 0.14
HDAC9-208ENST00000417496 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
HDAC9-208ENST00000417496 MYH7BA7E2Y1 1941 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 RSPH10B2B2RC85 870 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 MEIS2O14770 477 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 HEXIM1O94992 359 aaKnown RBP15.92■□□□□ 0.14
HDAC9-208ENST00000417496 RSPH10BP0C881 870 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 GCFC2P16383 781 aaKnown RBP15.92■□□□□ 0.14
HDAC9-208ENST00000417496 HOXD13P35453 343 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 EPHB4P54760 987 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 CDC37Q16543 378 aaPredicted RBP15.92■□□□□ 0.14
HDAC9-208ENST00000417496 TTMPQ5BVD1 217 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 GRID2IPA4D2P6 1211 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 PPEF1O14829 653 aaPredicted RBP15.92■□□□□ 0.14
HDAC9-208ENST00000417496 MYBP10242 640 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 SEPT2Q15019 361 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 DCAF17Q5H9S7 520 aaPredicted RBP15.92■□□□□ 0.14
HDAC9-208ENST00000417496 KLHL7Q8IXQ5 586 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 GANQ9H2C0 597 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 DHX36Q9H2U1 1008 aaKnown RBP15.92■□□□□ 0.14
HDAC9-208ENST00000417496 HDAC9Q9UKV0 1011 aa15.92■□□□□ 0.14
HDAC9-208ENST00000417496 KDM3AQ9Y4C1 1321 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 PPFIA4O75335 1185 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 POLD1P28340 1107 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 HOXA10P31260 410 aaPredicted RBP15.91■□□□□ 0.14
HDAC9-208ENST00000417496 GIT2Q14161 759 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 ASIC2Q16515 512 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 ZNF571Q7Z3V5 609 aaPredicted RBP15.91■□□□□ 0.14
HDAC9-208ENST00000417496 SFR1Q86XK3 245 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms