RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 UPP2O95045 317 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 GJB5O95377 273 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 GGPS1O95749 300 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 KCNA5P22460 613 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 HOXA13P31271 388 aaPredicted RBP8.41□□□□□ -1.06
CASP4-202ENST00000417440 THPOP40225 353 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 HDAC1Q13547 482 aaPredicted RBP8.41□□□□□ -1.06
CASP4-202ENST00000417440 CCDC178Q5BJE1 867 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 TMEM31Q5JXX7 168 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 FCHSD1Q86WN1 690 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 HOMER1Q86YM7 354 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 MYOCDQ8IZQ8 938 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 STAG2Q8N3U4 1231 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 PPTC7Q8NI37 304 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 SPATA33Q96N06 139 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 C17orf80Q9BSJ5 609 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 AMNQ9BXJ7 453 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 MLXIPQ9HAP2 919 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 HCN4Q9Y3Q4 1203 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 SCN5AQ14524 2016 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
CASP4-202ENST00000417440 LCTP09848 1927 aa8.41□□□□□ -1.06
CASP4-202ENST00000417440 RSPH10B2B2RC85 870 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 KLRF2D3W0D1 207 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 LGR5O75473 907 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 PARNO95453 639 aaKnown RBP8.4□□□□□ -1.06
CASP4-202ENST00000417440 F2P00734 622 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 CXCL10P02778 98 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 AMHP03971 560 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 RSPH10BP0C881 870 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 RFC5P40937 340 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 ERVK-21P61565 698 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 MBTPS1Q14703 1052 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 QPCTQ16769 361 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 IMMTQ16891 758 aaKnown RBP8.4□□□□□ -1.06
CASP4-202ENST00000417440 TRIM71Q2Q1W2 868 aaKnown RBP8.4□□□□□ -1.06
CASP4-202ENST00000417440 HSDL1Q3SXM5 330 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 CELF3Q5SZQ8 465 aaKnown RBP8.4□□□□□ -1.06
CASP4-202ENST00000417440 IFIT1BQ5T764 474 aaKnown RBP8.4□□□□□ -1.06
CASP4-202ENST00000417440 DBF4BQ8NFT6 615 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 PIBF1Q8WXW3 757 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 GPKOWQ92917 476 aaPredicted RBP eCLIP8.4□□□□□ -1.06
CASP4-202ENST00000417440 UIMC1Q96RL1 719 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 UBE2ZQ9H832 354 aaPredicted RBP8.4□□□□□ -1.06
CASP4-202ENST00000417440 CD320Q9NPF0 282 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 INSL6Q9Y581 213 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 PCDHA1Q9Y5I3 950 aa8.4□□□□□ -1.06
CASP4-202ENST00000417440 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 HAS3O00219 553 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 NOP56O00567 594 aaKnown RBP8.39□□□□□ -1.07
CASP4-202ENST00000417440 OPLAHO14841 1288 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 PPP1R11O60927 126 aaPredicted RBP8.39□□□□□ -1.07
CASP4-202ENST00000417440 EFCAB14O75071 495 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 PPFIA4O75335 1185 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 RGS20O76081 388 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 CSPG5O95196 566 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 CTSHP09668 335 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 HSD17B4P51659 736 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 SP2Q02086 613 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 SP4Q02446 784 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 RBL2Q08999 1139 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 CSPP1Q1MSJ5 1256 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 TRAF7Q6Q0C0 670 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 CHD1LQ86WJ1 897 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 IL31RAQ8NI17 732 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 ANKS1AQ92625 1134 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 ATP6V0A1Q93050 837 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
CASP4-202ENST00000417440 YME1L1Q96TA2 773 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 PDCD2LQ9BRP1 358 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 KRT23Q9C075 422 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 BCAS3Q9H6U6 928 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 RTEL1Q9NZ71 1219 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 LMCD1Q9NZU5 365 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 CTNNA3Q9UI47 895 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
CASP4-202ENST00000417440 TRANK1O15050 2925 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 H3BQ06 376 aaPredicted RBP8.38□□□□□ -1.07
CASP4-202ENST00000417440 H3BRB1 525 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 GCOM1H8Y6P7 765 aaPredicted RBP8.38□□□□□ -1.07
CASP4-202ENST00000417440 ZBTB5O15062 677 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 TREHO43280 583 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 POLR2MP0CAP2 368 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 SMIM10L2AP0DMW4 78 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 SMIM10L2BP0DMW5 78 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 IL9P15248 144 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 UBA1P22314 1058 aaKnown RBP8.38□□□□□ -1.07
CASP4-202ENST00000417440 CCND2P30279 289 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 PGM5Q15124 567 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
CASP4-202ENST00000417440 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
CASP4-202ENST00000417440 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
CASP4-202ENST00000417440 KCNV1Q6PIU1 500 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 CYB5R4Q7L1T6 521 aa8.38□□□□□ -1.07
CASP4-202ENST00000417440 SERINC5Q86VE9 423 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms