RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KRT76Q01546 638 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 KIAA0753Q2KHM9 967 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 FAM47CQ5HY64 1035 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 MCTP1Q6DN14 999 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 ZNF746Q6NUN9 644 aaPredicted RBP26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 C7orf31Q8N865 590 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 SLC5A5Q92911 643 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 FAM20AQ96MK3 541 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 AZI2Q9H6S1 392 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 MYH7BA7E2Y1 1941 aa26.13■■□□□ 1.77
SMARCB1-205ENST00000417137 HAS3O00219 553 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 GAS7O60861 476 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 HSP90AA1P07900 732 aaKnown RBP26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 SUPT20HL2P0C7V6 817 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 LRCH2Q5VUJ6 765 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 GLG1Q92896 1179 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 UIMC1Q96RL1 719 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 TEKT3Q9BXF9 490 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 SMARCAD1Q9H4L7 1026 aa26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 NOL7Q9UMY1 257 aaKnown RBP26.12■■□□□ 1.77
SMARCB1-205ENST00000417137 TBX3O15119 743 aa26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 ATG7O95352 703 aa26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 BAG4O95429 457 aaKnown RBP26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 CLTBP09497 229 aa26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 MIS18BP1Q6P0N0 1132 aa26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 FAM126BQ8IXS8 530 aa26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 SMAP1Q8IYB5 467 aaPredicted RBP26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 TELO2Q9Y4R8 837 aa26.11■■□□□ 1.77
SMARCB1-205ENST00000417137 SLC37A4O43826 429 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 TRAPPC10P48553 1259 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 SESTD1Q86VW0 696 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 SLFN12Q8IYM2 578 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 ETNPPLQ8TBG4 499 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 TNPO1Q92973 898 aaKnown RBP26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 TMEM39AQ9NV64 488 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 ERAP1Q9NZ08 941 aa26.1■■□□□ 1.77
SMARCB1-205ENST00000417137 LGR5O75473 907 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 CCNE2O96020 404 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 ATP2B1P20020 1258 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 FAAP100Q0VG06 881 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 FAM160B1Q5W0V3 765 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 ABHD15Q6UXT9 468 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 KCNMB3Q9NPA1 279 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 PRDM5Q9NQX1 630 aaPredicted RBP26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 SAMM50Q9Y512 469 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 PCDHA10Q9Y5I2 948 aa26.09■■□□□ 1.77
SMARCB1-205ENST00000417137 H0YGN5 161 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 BACH1O14867 736 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 PSMD10O75832 226 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 CD4P01730 458 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 PSAPP07602 524 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 SFNP31947 248 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 STAT5BP51692 787 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 ORC2Q13416 577 aaPredicted RBP26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 PLPPR4Q7Z2D5 763 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 PDLIM7Q9NR12 457 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 FOXD4L1Q9NU39 408 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 HDAC6Q9UBN7 1215 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 ZMYND8Q9ULU4 1186 aaPredicted RBP26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 EMSYQ7Z589 1322 aa26.08■■□□□ 1.77
SMARCB1-205ENST00000417137 WDR64B1ANS9 1081 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 KIF28PB7ZC32 967 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 NEMFO60524 1076 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 SLC26A2P50443 739 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 FXR1P51114 621 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 JAK3P52333 1124 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 TRIM50Q86XT4 487 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 RDM1Q8NG50 284 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 TRPV6Q9H1D0 765 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 GTF2IRD1Q9UHL9 959 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 NOD1Q9Y239 953 aa26.07■■□□□ 1.76
SMARCB1-205ENST00000417137 IGKV6D-21A0A0A0MT36 114 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 B4GALT4O60513 344 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 GNAT1P11488 350 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 SYN1P17600 705 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 CALCRLQ16602 461 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 POTEDQ86YR6 584 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 DISC1Q9NRI5 854 aa26.06■■□□□ 1.76
SMARCB1-205ENST00000417137 KIAA0355O15063 1070 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 MCM7P33993 719 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 PTGISQ16647 500 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 TTC38Q5R3I4 469 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 SWSAP1Q6NVH7 229 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 GJA10Q969M2 543 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 PCYT2Q99447 389 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 UNC45AQ9H3U1 944 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 ZNF302Q9NR11 478 aa26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 TRMT13Q9NUP7 481 aaKnown RBP26.05■■□□□ 1.76
SMARCB1-205ENST00000417137 SCN10AQ9Y5Y9 1956 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 C17orf102A2RUQ5 167 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 VPS37CA5D8V6 355 aaPredicted RBP26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 SMIM10L2AP0DMW4 78 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 SMIM10L2BP0DMW5 78 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 PDIA4P13667 645 aaKnown RBP26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 RAG1P15918 1043 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 RILPL1Q5EBL4 403 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 MIER3Q7Z3K6 550 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 AFAP1L1Q8TED9 768 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 PPP1R13LQ8WUF5 828 aa26.04■■□□□ 1.76
SMARCB1-205ENST00000417137 HAS1Q92839 578 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms