RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 GBF1Q92538 1859 aa17.83■□□□□ 0.44
ITGB1-204ENST00000417122 MEIS1O00470 390 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 CPLX1O14810 134 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
ITGB1-204ENST00000417122 TRIM71Q2Q1W2 868 aaKnown RBP17.82■□□□□ 0.44
ITGB1-204ENST00000417122 SERINC5Q86VE9 423 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 BICD2Q8TD16 824 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 TIFAQ96CG3 184 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 SDF4Q9BRK5 362 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 JPH1Q9HDC5 661 aaPredicted RBP17.82■□□□□ 0.44
ITGB1-204ENST00000417122 SETD4Q9NVD3 440 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 VPS54Q9P1Q0 977 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 SLC9A2Q9UBY0 812 aa17.82■□□□□ 0.44
ITGB1-204ENST00000417122 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
ITGB1-204ENST00000417122 KAT6AQ92794 2004 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 NFASCO94856 1347 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 TREHO43280 583 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 CYP3A4P08684 503 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 GNAT1P11488 350 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 GPNMBQ14956 572 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 RAB30Q15771 203 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 ZNF618Q5T7W0 954 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
ITGB1-204ENST00000417122 NIPA1Q7RTP0 329 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 CRYGNQ8WXF5 182 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 CDX2Q99626 313 aaPredicted RBP17.81■□□□□ 0.44
ITGB1-204ENST00000417122 ZNF576Q9H609 170 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
ITGB1-204ENST00000417122 SH3GLB2Q9NR46 395 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 MSRAQ9UJ68 235 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 TET1Q8NFU7 2136 aa17.81■□□□□ 0.44
ITGB1-204ENST00000417122 FAM86B1E9PN63 330 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 NBNO60934 754 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 DEXIO95424 95 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 FAM86B2P0C5J1 330 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 THPOP40225 353 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 ITGB3BPQ13352 177 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-204ENST00000417122 PLA2G4DQ86XP0 818 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 RASGRP4Q8TDF6 673 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 GLG1Q92896 1179 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 SMARCAD1Q9H4L7 1026 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 ERAP1Q9NZ08 941 aa17.8■□□□□ 0.44
ITGB1-204ENST00000417122 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 BAIAP3O94812 1187 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 CXCL10P02778 98 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 ATP2A2P16615 1042 aaKnown RBP17.79■□□□□ 0.44
ITGB1-204ENST00000417122 MARK3P27448 753 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 NLRP5P59047 1200 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 ACTR2P61160 394 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 SCRN1Q12765 414 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 TRAF7Q6Q0C0 670 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 LMBR1Q8WVP7 490 aa17.79■□□□□ 0.44
ITGB1-204ENST00000417122 SLKQ9H2G2 1235 aaPredicted RBP17.79■□□□□ 0.44
ITGB1-204ENST00000417122 IGLV3-22A0A075B6J6 115 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 RSPH10B2B2RC85 870 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 LGR5O75473 907 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 RSPH10BP0C881 870 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 RABGGTBP53611 331 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 ADAM17P78536 824 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 GRIN2CQ14957 1233 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 ANKRD1Q15327 319 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 CNKSR3Q6P9H4 555 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 PHOSPHO2Q8TCD6 241 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 MYLIPQ8WY64 445 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 IL17RAQ96F46 866 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 SLC9A7Q96T83 725 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 PCYT2Q99447 389 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 AZI2Q9H6S1 392 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 TPCN1Q9ULQ1 816 aa17.78■□□□□ 0.44
ITGB1-204ENST00000417122 YBX2Q9Y2T7 364 aaKnown RBP17.78■□□□□ 0.44
ITGB1-204ENST00000417122 DDX39AO00148 427 aaKnown RBP17.77■□□□□ 0.44
ITGB1-204ENST00000417122 CDKL5O76039 1030 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 SEC24BO95487 1268 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 AK2P54819 239 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 SETQ01105 290 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-204ENST00000417122 PPFIA1Q13136 1202 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 PCDHA4Q9UN74 947 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 PCDHA11Q9Y5I1 949 aa17.77■□□□□ 0.44
ITGB1-204ENST00000417122 IPO5O00410 1097 aaKnown RBP17.76■□□□□ 0.43
ITGB1-204ENST00000417122 PFKFB2O60825 505 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 CAND2O75155 1236 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 ATG7O95352 703 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 KCNJ6P48051 423 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 GRIK4Q16099 956 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 AIFM3Q96NN9 605 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 ZNF577Q9BSK1 485 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 SLC28A3Q9HAS3 691 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
ITGB1-204ENST00000417122 DHX15O43143 795 aaKnown RBP17.75■□□□□ 0.43
ITGB1-204ENST00000417122 CCNE2O96020 404 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 CTSHP09668 335 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 MYOGP15173 224 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 FOSL2P15408 326 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 CIITAP33076 1130 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 STAT5BP51692 787 aa17.75■□□□□ 0.43
ITGB1-204ENST00000417122 WDR5P61964 334 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms