RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 BCAS3Q9H6U6 928 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 A1CFQ9NQ94 594 aaKnown RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 BTBD7Q9P203 1132 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 WRAP73Q9P2S5 460 aaPredicted RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 ADD3Q9UEY8 706 aaKnown RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 UBIAD1Q9Y5Z9 338 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 LCTP09848 1927 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 A0A1B0GTH6 734 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 N4BP3O15049 544 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 SORBS3O60504 671 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 ERCC3P19447 782 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 SFPQP23246 707 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 OAZ1P54368 228 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 CCZ1BP86790 482 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 CCZ1P86791 482 aaPredicted RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 PPATQ06203 517 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 ITGB3BPQ13352 177 aaPredicted RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 FAM26FQ5R3K3 315 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 CCDC65Q8IXS2 484 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 RUSC1Q9BVN2 902 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 ACAD9Q9H845 621 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 AGO4Q9HCK5 861 aaKnown RBP11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 JADE2Q9NQC1 790 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 PNMA2Q9UL42 364 aa11.88□□□□□ -0.51
SMPD4P1-201ENST00000416717 WDR81Q562E7 1941 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 SFI1A8K8P3 1242 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 ATP9AO75110 1047 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 COPB1P53618 953 aaKnown RBP11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 IRX3P78415 501 aaPredicted RBP11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 FILIP1LQ4L180 1135 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 MIER3Q7Z3K6 550 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 NELFCDQ8IXH7 590 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 SYT2Q8N9I0 419 aaPredicted RBP11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 CPLX3Q8WVH0 158 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 REEP2Q9BRK0 252 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 MAP3K20Q9NYL2 800 aaKnown RBP11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 CYP39A1Q9NYL5 469 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 LOC285556D6RIA3 1793 aa11.87□□□□□ -0.51
SMPD4P1-201ENST00000416717 A0A0G2JLL6 359 aaPredicted RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 BICDL2A1A5D9 508 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 NR3C2P08235 984 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 ADKP55263 362 aaKnown RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 EHHADHQ08426 723 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 SEMA3FQ13275 785 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 GIT2Q14161 759 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 DNTTIP2Q5QJE6 756 aaKnown RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 ARMC9Q7Z3E5 817 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 PRRT2Q7Z6L0 340 aaPredicted RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 ANKRD20A12PQ8NF67 263 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 LXNQ9BS40 222 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 TUFT1Q9NNX1 390 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 MAGEC2Q9UBF1 373 aaPredicted RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 LIMA1Q9UHB6 759 aaKnown RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 STK24Q9Y6E0 443 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 FRMPD4Q14CM0 1322 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 NKRFO15226 690 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 DHX15O43143 795 aaKnown RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 SLC26A4O43511 780 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 EYA4O95677 639 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 BCRP11274 1271 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 CNTN2Q02246 1040 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 NCAPG2Q86XI2 1143 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 ANKRD35Q8N283 1001 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 CCDC150Q8NCX0 1101 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 RIT2Q99578 217 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 R3HDMLQ9H3Y0 253 aa11.86□□□□□ -0.51
SMPD4P1-201ENST00000416717 ATP2A1O14983 1001 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 CCND2P30279 289 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 SP4Q02446 784 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 PSMD2Q13200 908 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 EPHA7Q15375 998 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 CEP135Q66GS9 1140 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 LBX2Q6XYB7 198 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 SFR1Q86XK3 245 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 GUF1Q8N442 669 aaKnown RBP11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 CASP5P51878 434 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 UBXN1Q04323 297 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 SPAG1Q07617 926 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 FSTL1Q12841 308 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 CENPPQ6IPU0 288 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 RINT1Q6NUQ1 792 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 B3GNT9Q6UX72 402 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 MAEAQ7L5Y9 396 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 NIPA1Q7RTP0 329 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
SMPD4P1-201ENST00000416717 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 600.2 ms