RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 MYO1EQ12965 1108 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 MAP7Q14244 749 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 PDIA6Q15084 440 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 PTPAQ15257 358 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 RPS6KA2Q15349 733 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 RABL6Q3YEC7 729 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 FAM83BQ5T0W9 1011 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 AP1ARQ63HQ0 302 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 DNAAF5Q86Y56 855 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 KIRREL3Q8IZU9 778 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 RAB3IPQ96QF0 476 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 HPCAL4Q9UM19 191 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 RABGAP1Q9Y3P9 1069 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 ATF2P15336 505 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 HP1BP3Q5SSJ5 553 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 LRRC31Q6UY01 552 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 SGMS1Q86VZ5 419 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 ATP8A2Q9NTI2 1148 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 RBM12Q9NTZ6 932 aaKnown RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 INTUQ9ULD6 942 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 ABCC12Q96J65 1359 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 QRICH2Q9H0J4 1663 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 E9PMD0 336 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 KCNJ6P48051 423 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 YWHAGP61981 247 aaKnown RBP eCLIP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 SPATS2Q86XZ4 545 aaKnown RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 TET3O43151 1660 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 LRRD1A4D1F6 860 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
SCN1B-202ENST00000415950 BFSP1Q12934 665 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 ODR4Q5SWX8 454 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 MAIP1Q8WWC4 291 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 SH2D4AQ9H788 454 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 USP40Q9NVE5 1235 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 RAB20Q9NX57 234 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 K7ENM7 598 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 CHUKO15111 745 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 ARL8AQ96BM9 186 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 IQCDQ96DY2 449 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
SCN1B-202ENST00000415950 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 LAMC1P11047 1609 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 PHF20L1A8MW92 1017 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 MIER3Q7Z3K6 550 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 NLRP14Q86W24 1093 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
SCN1B-202ENST00000415950 SEMA3EO15041 775 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 TOM1O60784 492 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 ZNF746Q6NUN9 644 aaPredicted RBP13.96□□□□□ -0.17
SCN1B-202ENST00000415950 EPB41L4AQ9HCS5 686 aaPredicted RBP13.96□□□□□ -0.17
SCN1B-202ENST00000415950 SERPING1P05155 500 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 MMEP08473 750 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 XKR9Q5GH70 373 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 UNC13BO14795 1591 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
SCN1B-202ENST00000415950 DPYDQ12882 1025 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 PPP2R5EQ16537 467 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 PIGOQ8TEQ8 1089 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 GLG1Q92896 1179 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 LARSQ9P2J5 1176 aaKnown RBP13.96□□□□□ -0.17
SCN1B-202ENST00000415950 PASKQ96RG2 1323 aa13.96□□□□□ -0.17
SCN1B-202ENST00000415950 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 SIK1P57059 783 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 FAM98CQ17RN3 349 aaKnown RBP13.96□□□□□ -0.18
SCN1B-202ENST00000415950 PDCD7Q8N8D1 485 aaKnown RBP13.96□□□□□ -0.18
SCN1B-202ENST00000415950 PPP4R1Q8TF05 950 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 KCNB2Q92953 911 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 CCT8L2Q96SF2 557 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 BHMT2Q9H2M3 363 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 ANKZF1Q9H8Y5 726 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.18
SCN1B-202ENST00000415950 FBXL5Q9UKA1 691 aa13.96□□□□□ -0.18
SCN1B-202ENST00000415950 GMNCA6NCL1 334 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L15C9J2P7 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L13C9JLJ4 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L11C9JVI0 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L18D6R9N7 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L22D6RA61 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L17D6RBQ6 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L19D6RCP7 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L20D6RJB6 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 RASGRF2O14827 1237 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L24Q0WX57 530 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 RBBP5Q15291 538 aaKnown RBP13.95□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 WHAMMQ8TF30 809 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 TMEM60Q9H2L4 133 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 SPECC1L-ADORA2AF8WAN1 911 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 PPP1R37O75864 691 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 ABL1P00519 1130 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 AFPP02771 609 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms