RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 LETM2Q2VYF4 491 aa15.46■□□□□ 0.07
CPNE1-209ENST00000415920 NEK8Q86SG6 692 aa15.46■□□□□ 0.07
CPNE1-209ENST00000415920 SCLYQ96I15 445 aa15.46■□□□□ 0.07
CPNE1-209ENST00000415920 ZFP91Q96JP5 570 aaPredicted RBP15.46■□□□□ 0.07
CPNE1-209ENST00000415920 BRD1O95696 1058 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 FGBP02675 491 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 NR3C2P08235 984 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 ZNF76P36508 570 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 NUCB2P80303 420 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 FOXD4L6Q3SYB3 417 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-209ENST00000415920 PCNX4Q63HM2 1172 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 FOXD4L3Q6VB84 417 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-209ENST00000415920 GAS2L1Q99501 681 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-209ENST00000415920 AP5M1Q9H0R1 490 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 TRMT13Q9NUP7 481 aaKnown RBP15.45■□□□□ 0.06
CPNE1-209ENST00000415920 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
CPNE1-209ENST00000415920 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
CPNE1-209ENST00000415920 MYH9P35579 1960 aaKnown RBP15.44■□□□□ 0.06
CPNE1-209ENST00000415920 CHD7Q9P2D1 2997 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 TDP2O95551 362 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 CYP2C9P11712 490 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 TTC38Q5R3I4 469 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 MYSM1Q5VVJ2 828 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 FAM173BQ6P4H8 233 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 MORC4Q8TE76 937 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 SYMPKQ92797 1274 aaKnown RBP15.44■□□□□ 0.06
CPNE1-209ENST00000415920 IWS1Q96ST2 819 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 ZSCAN16Q9H4T2 348 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-209ENST00000415920 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 RAPGEFL1Q9UHV5 662 aa15.44■□□□□ 0.06
CPNE1-209ENST00000415920 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
CPNE1-209ENST00000415920 CABYRO75952 493 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 IGFBP4P22692 258 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 EDNRBP24530 442 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 NBR1Q14596 966 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
CPNE1-209ENST00000415920 RAB30Q15771 203 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 STXBP2Q15833 593 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 IQSEC1Q6DN90 963 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 VTA1Q9NP79 307 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 MSRAQ9UJ68 235 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 ZDHHC9Q9Y397 364 aa15.43■□□□□ 0.06
CPNE1-209ENST00000415920 TNFRSF10AO00220 468 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 WNT7AO00755 349 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
CPNE1-209ENST00000415920 TTLL4Q14679 1199 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 PRR16Q569H4 304 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 RILPL1Q5EBL4 403 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 CRYGNQ8WXF5 182 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 NAP1L4Q99733 375 aaKnown RBP15.42■□□□□ 0.06
CPNE1-209ENST00000415920 THEGQ9P2T0 379 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 DDX25Q9UHL0 483 aaKnown RBP15.42■□□□□ 0.06
CPNE1-209ENST00000415920 SCN10AQ9Y5Y9 1956 aa15.42■□□□□ 0.06
CPNE1-209ENST00000415920 LOXHD1Q8IVV2 1947 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 SLC37A4O43826 429 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 NEMFO60524 1076 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 MYL3P08590 195 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 CYP3A4P08684 503 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 GCFC2P16383 781 aaKnown RBP15.41■□□□□ 0.06
CPNE1-209ENST00000415920 NCLP19338 710 aaKnown RBP15.41■□□□□ 0.06
CPNE1-209ENST00000415920 MCM7P33993 719 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 TRAPPC10P48553 1259 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 PURAQ00577 322 aaKnown RBP15.41■□□□□ 0.06
CPNE1-209ENST00000415920 SETQ01105 290 aaPredicted RBP15.41■□□□□ 0.06
CPNE1-209ENST00000415920 MTMR1Q13613 665 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 SEPT14Q6ZU15 432 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 COPS5Q92905 334 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 ASB2Q96Q27 587 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPNE1-209ENST00000415920 SLC28A3Q9HAS3 691 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 Q9Y3F1 56 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 PCDHB6Q9Y5E3 794 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
CPNE1-209ENST00000415920 REV3LO60673 3130 aa15.41■□□□□ 0.06
CPNE1-209ENST00000415920 TANC1Q9C0D5 1861 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 ZBBXA8MT70 800 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 FAM86B1E9PN63 330 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 RFXAPO00287 272 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 ZEB2O60315 1214 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
CPNE1-209ENST00000415920 STAM2O75886 525 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 ARHGEF15O94989 841 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 FAM86B2P0C5J1 330 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 TOB1P50616 345 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-209ENST00000415920 USP11P51784 963 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
CPNE1-209ENST00000415920 CEP55Q53EZ4 464 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 MOXD1Q6UVY6 613 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 DEFB128Q7Z7B8 93 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 VSIG10LQ86VR7 867 aa15.4■□□□□ 0.06
CPNE1-209ENST00000415920 PLA2G4DQ86XP0 818 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms