RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 CYB5R4Q7L1T6 521 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 CYFIP1Q7L576 1253 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 FIBCD1Q8N539 461 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 APBB2Q92870 758 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 IL17RAQ96F46 866 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 PIGSQ96S52 555 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 ESYT1Q9BSJ8 1104 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 USP26Q9BXU7 913 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 ANO2Q9NQ90 1003 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 TELO2Q9Y4R8 837 aa15.27■□□□□ 0.04
CTHRC1-202ENST00000415886 MUC6Q6W4X9 2439 aa15.27■□□□□ 0.03
CTHRC1-202ENST00000415886 DOCK5Q9H7D0 1870 aa15.27■□□□□ 0.03
CTHRC1-202ENST00000415886 PALM3A6NDB9 673 aaPredicted RBP15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 C5orf67F2Z3F1 127 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 GRM6O15303 877 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 MRPS9P82933 396 aaKnown RBP15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 ARHGAP4P98171 946 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 HYAL1Q12794 435 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 SEMA3FQ13275 785 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 WTAPQ15007 396 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 SEC23AQ15436 765 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 RNF20Q5VTR2 975 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 SAMD3Q8N6K7 520 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 LMBR1Q8WVP7 490 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 GPR20Q99678 358 aa15.26■□□□□ 0.03
CTHRC1-202ENST00000415886 ADGRA3Q8IWK6 1321 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 MBTPS2O43462 519 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 GHRP10912 638 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 GNAT1P11488 350 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 ICAM3P32942 547 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 GTF2F1P35269 517 aaKnown RBP eCLIP15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 BMPR1AP36894 532 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 ADAM17P78536 824 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 SMAD2Q15796 467 aaKnown RBP15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 CTC1Q2NKJ3 1217 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 GNPTABQ3T906 1256 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 FAM26DQ5JW98 314 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 METTL7BQ6UX53 244 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 INPP4AQ96PE3 977 aaPredicted RBP15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 C11orf84Q9BUA3 381 aaPredicted RBP15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 KCNH6Q9H252 994 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 MUTYHQ9UIF7 546 aa15.25■□□□□ 0.03
CTHRC1-202ENST00000415886 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 SPATA31C2B4DYI2 1134 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 LINC01565O15544 149 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 NCK2O43639 380 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 CYTH3O43739 400 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 TBX10O75333 385 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 CDC45O75419 566 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 CHRNA1P02708 482 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 RB1P06400 928 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 SP4Q02446 784 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 TRAF1Q13077 416 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 NEDD9Q14511 834 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 NFXL1Q6ZNB6 911 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 RUFY4Q6ZNE9 571 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 SKAP1Q86WV1 359 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 LMAN2LQ9H0V9 348 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 RIOX1Q9H6W3 641 aa15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 RC3H2Q9HBD1 1191 aaKnown RBP15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 ZNF215Q9UL58 517 aaPredicted RBP15.24■□□□□ 0.03
CTHRC1-202ENST00000415886 FIBPO43427 364 aa15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 MCM5P33992 734 aa15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 GRM4Q14833 912 aa15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 IGFLR1Q9H665 355 aa15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
CTHRC1-202ENST00000415886 CCDC69A6NI79 296 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 SLC27A2O14975 620 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 STAM2O75886 525 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 MGAT3Q09327 533 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 SMAD4Q13485 552 aaKnown RBP15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 BTG3Q14201 252 aaPredicted RBP15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 LPIN1Q14693 890 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 RNF135Q8IUD6 432 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 PIBF1Q8WXW3 757 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 CLP1Q92989 425 aaKnown RBP15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 EHMT1Q9H9B1 1298 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 SENP2Q9HC62 589 aa15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 ALG13Q9NP73 1137 aaKnown RBP15.22■□□□□ 0.03
CTHRC1-202ENST00000415886 NRCAMQ92823 1304 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 PNMA6FA0A0J9YX94 578 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 STXBP3O00186 592 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 ENPP3O14638 875 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 PRC1O43663 620 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 MMP1P03956 469 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 KIF5BP33176 963 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 CAMK1Q14012 370 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 ZNF689Q96CS4 500 aaPredicted RBP15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 TMEM87BQ96K49 555 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms